WormBase Tree Display for Gene: WBGene00003859
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WBGene00003859 | SMap | S_parent | Sequence | C09E7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 3H612 | |||||
WormQTL | gene | WBGene00003859 | |||||||
WormFlux | gene | WBGene00003859 | |||||||
NDB | locus_tag | CELE_C09E7.3 | |||||||
NCBI | gene | 182450 | |||||||
RefSeq | protein | NM_066038.3 | |||||||
SwissProt | UniProtAcc | Q9N5Z2 | |||||||
UniProt_GCRP | UniProtAcc | Q9N5Z2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | oig | ||||||||
Allele (28) | |||||||||
Strain | WBStrain00002148 | ||||||||
WBStrain00036436 | |||||||||
WBStrain00037716 | |||||||||
WBStrain00047363 | |||||||||
WBStrain00047365 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00095690 | ||||||||
00095691 | |||||||||
00095692 | |||||||||
00095693 | |||||||||
00095694 | |||||||||
00095695 | |||||||||
00095696 | |||||||||
00095697 | |||||||||
Ortholog (15) | |||||||||
Paralog | WBGene00043050 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Predicted to be involved in nervous system development. Predicted to be located in extracellular region; membrane; and neuron projection. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C09E7.3 | |||||||
Corresponding_transcript | C09E7.3.1 | ||||||||
Other_sequence | CRC10323_1 | ||||||||
ACC16026_1 | |||||||||
CR05554 | |||||||||
Name_isotig02563 | |||||||||
Acan_isotig16187 | |||||||||
FC540677.1 | |||||||||
FC540742.1 | |||||||||
Associated_feature | WBsf717919 | ||||||||
WBsf992787 | |||||||||
WBsf226842 | |||||||||
Experimental_info | RNAi_result | WBRNAi00040189 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007110 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040190 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00097920 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (12) | |||||||||
Drives_construct | WBCnstr00001434 | ||||||||
WBCnstr00001435 | |||||||||
WBCnstr00001436 | |||||||||
WBCnstr00001437 | |||||||||
WBCnstr00001438 | |||||||||
WBCnstr00002907 | |||||||||
WBCnstr00017036 | |||||||||
WBCnstr00022306 | |||||||||
WBCnstr00035825 | |||||||||
Construct_product | WBCnstr00020655 | ||||||||
WBCnstr00020968 | |||||||||
WBCnstr00021051 | |||||||||
WBCnstr00022306 | |||||||||
WBCnstr00035825 | |||||||||
Microarray_results (16) | |||||||||
Expression_cluster (112) | |||||||||
Interaction | WBInteraction000525407 | ||||||||
WBInteraction000525408 | |||||||||
WBInteraction000525409 | |||||||||
WBInteraction000534833 | |||||||||
WBInteraction000534834 | |||||||||
WBInteraction000541824 | |||||||||
WBInteraction000576768 | |||||||||
Map_info | Map | III | Position | -1.09923 | Error | 0.004864 | |||
Positive | Positive_clone | C09E7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00042846 | ||||||||
WBPaper00043839 | |||||||||
WBPaper00046950 | |||||||||
WBPaper00048350 | |||||||||
WBPaper00048563 | |||||||||
WBPaper00053207 | |||||||||
WBPaper00055155 | |||||||||
WBPaper00056064 | |||||||||
WBPaper00061622 | |||||||||
Remark | Sequence connection from [Aurelio O, Hobert O] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |