WormBase Tree Display for Gene: WBGene00003860
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| WBGene00003860 | SMap | S_parent | Sequence | Y38F1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | oig-2 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y38F1A.9 | ||||||||
| Molecular_name | Y38F1A.9 | ||||||||
| Y38F1A.9.1 | |||||||||
| CE21614 | |||||||||
| Other_name | CELE_Y38F1A.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | oig-2 | ||||||||
| DB_info | Database | AceView | gene | 2N298 | |||||
| WormQTL | gene | WBGene00003860 | |||||||
| WormFlux | gene | WBGene00003860 | |||||||
| NDB | locus_tag | CELE_Y38F1A.9 | |||||||
| NCBI | gene | 189675 | |||||||
| RefSeq | protein | NM_064366.3 | |||||||
| TrEMBL | UniProtAcc | Q9XWM1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWM1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | oig | ||||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103661 | ||||||||
| Contained_in_operon | CEOP2670 | ||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in axon guidance and cell adhesion. Located in sarcoplasmic reticulum. Expressed in several structures, including midbody; neurons; pharynx; tail; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38F1A.9 | |||||||
| Corresponding_transcript | Y38F1A.9.1 | ||||||||
| Other_sequence (40) | |||||||||
| Associated_feature | WBsf650679 | ||||||||
| WBsf990292 | |||||||||
| WBsf990293 | |||||||||
| WBsf1013544 | |||||||||
| WBsf1013545 | |||||||||
| WBsf1013546 | |||||||||
| WBsf224134 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036857 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056040 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020295 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024220 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1756 | ||||||||
| Expr4489 | |||||||||
| Expr4490 | |||||||||
| Expr9420 | |||||||||
| Expr1012315 | |||||||||
| Expr1159563 | |||||||||
| Expr2014619 | |||||||||
| Expr2032852 | |||||||||
| Drives_construct | WBCnstr00001433 | ||||||||
| WBCnstr00012057 | |||||||||
| WBCnstr00012059 | |||||||||
| Construct_product | WBCnstr00013985 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction | WBInteraction000209646 | ||||||||
| WBInteraction000293945 | |||||||||
| WBInteraction000295891 | |||||||||
| WBInteraction000550191 | |||||||||
| WBInteraction000551516 | |||||||||
| WBInteraction000557801 | |||||||||
| WBInteraction000563231 | |||||||||
| Map_info | Map | II | Position | 13.4769 | Error | 0.088273 | |||
| Positive | Positive_clone | Y38F1A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027076 | ||||||||
| WBPaper00038444 | |||||||||
| Remark | Sequence connection from [Aurelio O, Hobert O] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
