WormBase Tree Display for Gene: WBGene00003958
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| WBGene00003958 | SMap | S_parent | Sequence | F23B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pcp-3 | Person_evidence | WBPerson564 | |||||
| Sequence_name | F23B2.11 | ||||||||
| Molecular_name | F23B2.11 | ||||||||
| F23B2.11.1 | |||||||||
| CE40648 | |||||||||
| Other_name | CELE_F23B2.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pcp-3 | ||||||||
| DB_info | Database | AceView | gene | 4J920 | |||||
| WormQTL | gene | WBGene00003958 | |||||||
| WormFlux | gene | WBGene00003958 | |||||||
| NDB | locus_tag | CELE_F23B2.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003958|UniProtKB=O02252 | |||||||
| family | PTHR11010 | ||||||||
| NCBI | gene | 177740 | |||||||
| RefSeq | protein | NM_001380398.3 | |||||||
| TREEFAM | TREEFAM_ID | TF314855 | |||||||
| TrEMBL | UniProtAcc | O02252 | |||||||
| UniProt_GCRP | UniProtAcc | O02252 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pcp | ||||||||
| Allele (50) | |||||||||
| In_cluster | conserved_RDE-1_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00026874 | ||||||||
| 00026875 | |||||||||
| 00026876 | |||||||||
| 00026877 | |||||||||
| 00026878 | |||||||||
| 00112071 | |||||||||
| 00112072 | |||||||||
| Ortholog (58) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. Is an ortholog of human PRSS16 (serine protease 16). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F23B2.11 | |||||||
| Corresponding_CDS_history | F23B2.11:wp169 | ||||||||
| Corresponding_transcript | F23B2.11.1 | ||||||||
| Other_sequence (69) | |||||||||
| Associated_feature | WBsf668141 | ||||||||
| WBsf717171 | |||||||||
| WBsf021636 | |||||||||
| WBsf230517 | |||||||||
| WBsf230518 | |||||||||
| WBsf230519 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013801 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045387 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089052 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016662 | ||||||||
| Expr1031883 | |||||||||
| Expr1149310 | |||||||||
| Expr2014785 | |||||||||
| Expr2033019 | |||||||||
| Drives_construct | WBCnstr00035774 | ||||||||
| Construct_product | WBCnstr00035774 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (236) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | IV | Position | 4.09164 | Error | 0.003421 | |||
| Positive | Positive_clone | F23B2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031095 | ||||||||
| WBPaper00037777 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
