WormBase Tree Display for Gene: WBGene00004038
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| WBGene00004038 | Evidence | Person_evidence | WBPerson51 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T01E8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | plc-3 | Person_evidence | WBPerson51 | |||||
| Sequence_name | T01E8.3 | ||||||||
| Molecular_name | T01E8.3 | ||||||||
| T01E8.3.1 | |||||||||
| CE42905 | |||||||||
| Other_name | CELE_T01E8.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | plc-3 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | plc | ||||||||
| Allele (92) | |||||||||
| Strain | WBStrain00030955 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00001177 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004036 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004037 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004039 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004045 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | plc-3 encodes a phospholipase C gamma homolog; PLC-3 activity is required for regulation of a number of biological processes, including ovulatory sheath contractions, nose touch, behavioral quiescence, oscillatory Ca2+ signaling in the intestine, innate immunity, and response to wounding; plc-3 reporter fusions are expressed in sheath cells and the spermatheca, the intestine, embryonic cells including the epidermal cells during morphogenesis, and the ALA neuron. | Paper_evidence | WBPaper00024307 | |||||
| WBPaper00026831 | |||||||||
| WBPaper00031030 | |||||||||
| WBPaper00031631 | |||||||||
| WBPaper00033094 | |||||||||
| WBPaper00035170 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 05 Jun 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable phosphatidylinositol phospholipase C activity. Involved in sleep. Expressed in ALA; gonad; intestine; and non-striated muscle. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; carcinoma (multiple); familial adenomatous polyposis; and familial cold autoinflammatory syndrome 3. Is an ortholog of human PLCG2 (phospholipase C gamma 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (11) | ||||||||
| Molecular_info | Corresponding_CDS | T01E8.3 | |||||||
| Corresponding_CDS_history | T01E8.3:wp193 | ||||||||
| Corresponding_transcript | T01E8.3.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf717029 | ||||||||
| WBsf717792 | |||||||||
| WBsf221986 | |||||||||
| Experimental_info | RNAi_result (39) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00006967 | ||||||||
| WBCnstr00007417 | |||||||||
| WBCnstr00011072 | |||||||||
| WBCnstr00013403 | |||||||||
| WBCnstr00016246 | |||||||||
| WBCnstr00022590 | |||||||||
| WBCnstr00022592 | |||||||||
| WBCnstr00035728 | |||||||||
| Construct_product | WBCnstr00011072 | ||||||||
| WBCnstr00013403 | |||||||||
| WBCnstr00022592 | |||||||||
| WBCnstr00035728 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction (91) | |||||||||
| WBProcess | WBbiopr:00000010 | ||||||||
| WBbiopr:00000039 | |||||||||
| WBbiopr:00000044 | |||||||||
| Map_info | Map | II | Position | 2.30656 | Error | 0.010836 | |||
| Positive | Positive_clone | T01E8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4856 | |||||||
| 4823 | |||||||||
| 4630 | |||||||||
| 4979 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (26) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
