WormBase Tree Display for Gene: WBGene00004098

WBGene00004098 SMap: S_parent: Sequence: AC3
  Identity: Version: 2
    Name: CGC_name: pqn-2 Person_evidence: WBPerson625
      Sequence_name: AC3.4
      Molecular_name: AC3.4
        AC3.4.1
        CE37872
      Other_name: CELE_AC3.4 Accession_evidence: NDB BX284605
      Public_name: pqn-2
    DB_info: Database: AceView gene 5K863
        WormQTL gene WBGene00004098
        WormFlux gene WBGene00004098
        NDB locus_tag CELE_AC3.4
        Panther gene CAEEL|WormBase=WBGene00004098|UniProtKB=Q17401
          family PTHR31895
        NCBI gene 181801
        RefSeq protein NM_073267.3
        TREEFAM TREEFAM_ID TF315535
        TrEMBL UniProtAcc Q17401
        UniProt_GCRP UniProtAcc Q17401
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 13 Dec 2004 12:08:14 WBPerson1846 Event: Split_into: WBGene00044023
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqn
    Allele (24)
    Strain: WBStrain00031834
    RNASeq_FPKM (74)
    Ortholog (27)
    Paralog (30)
    Structured_description: Concise_description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). Paper_evidence: WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in ALML; ALMR; BDUL; BDUR; and pharynx based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including aldicarb; Ethanol; and methylmercury hydroxide based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: AC3.4
    Corresponding_CDS_history: AC3.4:wp137
    Corresponding_transcript: AC3.4.1
    Other_sequence: Acan_isotig12020
    Associated_feature: WBsf232374
  Experimental_info: RNAi_result (24)
    Expr_pattern: Expr1142804
      Expr2015045
      Expr2033280
    Drives_construct: WBCnstr00035698
    Construct_product: WBCnstr00035698
    Microarray_results: GPL8673_AC3_4P00002
      GPL8673_AC3_4P00018
      GPL8673_AC3_4P00409
    Expression_cluster (94)
    Interaction: WBInteraction000030745
      WBInteraction000031527
      WBInteraction000223129
      WBInteraction000300019
      WBInteraction000422387
      WBInteraction000449635
      WBInteraction000513365
      WBInteraction000522076
  Map_info: Map: V Position: 2.5269 Error: 0.00409
    Positive: Positive_clone: AC3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5007
        5013
        4156
    Pseudo_map_position
  Reference: WBPaper00025139
    WBPaper00025642
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene