WormBase Tree Display for Gene: WBGene00004107
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| WBGene00004107 | SMap | S_parent | Sequence | C24B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-16 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C24B5.5 | ||||||||
| Molecular_name | C24B5.5a | ||||||||
| C24B5.5a.1 | |||||||||
| CE20523 | |||||||||
| C24B5.5b | |||||||||
| CE51445 | |||||||||
| C24B5.5b.1 | |||||||||
| Other_name | CELE_C24B5.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pqn-16 | ||||||||
| DB_info | Database | AceView | gene | 5J655 | |||||
| WormQTL | gene | WBGene00004107 | |||||||
| WormFlux | gene | WBGene00004107 | |||||||
| NDB | locus_tag | CELE_C24B5.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004107|UniProtKB=Q9TY01 | |||||||
| family | PTHR31895 | ||||||||
| NCBI | gene | 182836 | |||||||
| RefSeq | protein | NM_072977.3 | |||||||
| NM_001322581.3 | |||||||||
| TrEMBL | UniProtAcc | A0A131MB51 | |||||||
| Q9TY01 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9TY01 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (13) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in AMshL and AMshR based on single-cell RNA-seq studies. Is affected by several genes including eat-2; clk-1; and lin-35 based on microarray and RNA-seq studies. Is affected by seven chemicals including metformin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C24B5.5a | |||||||
| C24B5.5b | |||||||||
| Corresponding_transcript | C24B5.5a.1 | ||||||||
| C24B5.5b.1 | |||||||||
| Associated_feature | WBsf232220 | ||||||||
| WBsf232221 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029135 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041070 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013025 | ||||||||
| Expr1145104 | |||||||||
| Expr2015035 | |||||||||
| Expr2033270 | |||||||||
| Drives_construct | WBCnstr00035691 | ||||||||
| Construct_product | WBCnstr00035691 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (38) | |||||||||
| Interaction | WBInteraction000403989 | ||||||||
| WBInteraction000547348 | |||||||||
| Map_info | Map | V | Position | 1.94876 | Error | 0.000203 | |||
| Positive | Positive_clone | C24B5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
