WormBase Tree Display for Gene: WBGene00004166
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WBGene00004166 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | scc-2 | |||||||
Sequence_name | Y43H11AL.3 | ||||||||
Molecular_name | Y43H11AL.3a | ||||||||
Y43H11AL.3a.1 | |||||||||
CE53800 | |||||||||
Y43H11AL.3b | |||||||||
CE50846 | |||||||||
Y43H11AL.3a.2 | |||||||||
Y43H11AL.3b.1 | |||||||||
Other_name | Y43H11AL.a | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y43H11AL.b | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y43H11AL.e | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y43H11AL.f | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
pqn-85 | Paper_evidence | WBPaper00040110 | |||||||
CELE_Y43H11AL.3 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | scc-2 | ||||||||
DB_info | Database | AceView | gene | 2A532 | |||||
WormQTL | gene | WBGene00004166 | |||||||
WormFlux | gene | WBGene00004166 | |||||||
NDB | locus_tag | CELE_Y43H11AL.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004166|UniProtKB=Q95XZ5 | |||||||
family | PTHR21704 | ||||||||
NCBI | gene | 173410 | |||||||
RefSeq | protein | NM_001313675.3 | |||||||
NM_001377684.4 | |||||||||
SwissProt | UniProtAcc | Q95XZ5 | |||||||
UniProt_GCRP | UniProtAcc | Q95XZ5 | |||||||
OMIM | gene | 608667 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 16 Feb 2021 13:27:21 | WBPerson1983 | Name_change | Other_name | scc-2 | ||||
3 | 11 Mar 2021 09:37:10 | WBPerson1983 | Name_change | CGC_name | scc-2 | ||||
Other_name | pqn-85 | ||||||||
Status | Live | ||||||||
Gene_info (8) | |||||||||
Disease_info | Potential_model | DOID:11725 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:28862) | ||||
DOID:0080505 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:28862) | ||||||
Molecular_info | Corresponding_CDS | Y43H11AL.3a | |||||||
Y43H11AL.3b | |||||||||
Corresponding_CDS_history | Y43H11AL.3:wp112 | ||||||||
Y43H11AL.3a:wp274 | |||||||||
Corresponding_transcript | Y43H11AL.3a.1 | ||||||||
Y43H11AL.3a.2 | |||||||||
Y43H11AL.3b.1 | |||||||||
Other_sequence (15) | |||||||||
Associated_feature (11) | |||||||||
Experimental_info | RNAi_result (23) | ||||||||
Expr_pattern | Expr1014154 | ||||||||
Expr1032031 | |||||||||
Expr1160014 | |||||||||
Expr2015077 | |||||||||
Expr2033313 | |||||||||
Antibody | WBAntibody00002289 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (123) | |||||||||
Interaction | WBInteraction000036615 | ||||||||
WBInteraction000040815 | |||||||||
WBInteraction000521894 | |||||||||
WBInteraction000548804 | |||||||||
WBInteraction000548805 | |||||||||
WBInteraction000565533 | |||||||||
WBInteraction000575020 | |||||||||
WBInteraction000585366 | |||||||||
Map_info | Map | II | Position | -15.7162 | Error | 0.02322 | |||
Positive | Positive_clone | Y43H11AL | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027710 | ||||||||
WBPaper00027740 | |||||||||
WBPaper00034662 | |||||||||
WBPaper00038432 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00040110 | |||||||||
WBPaper00041549 | |||||||||
WBPaper00043670 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065958 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |