WormBase Tree Display for Gene: WBGene00004410

WBGene00004410 SMap: S_parent: Sequence: Y62E10A
  Identity: Version: 2
    Name: CGC_name: rla-2
      Sequence_name: Y62E10A.1
      Molecular_name: Y62E10A.1
        Y62E10A.1.1
        CE22694
      Other_name: CELE_Y62E10A.1 Accession_evidence: NDB BX284604
      Public_name: rla-2
    DB_info: Database: AceView gene 4O132
        WormQTL gene WBGene00004410
        WormFlux gene WBGene00004410
        NDB locus_tag CELE_Y62E10A.1
        Panther gene CAEEL|WormBase=WBGene00004410|UniProtKB=Q9U1X9
          family PTHR21141
        NCBI gene 178297
        RefSeq protein NM_001383231.2
        TREEFAM TREEFAM_ID TF320650
        TrEMBL UniProtAcc Q9U1X9
        UniProt_GCRP UniProtAcc Q9U1X9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 07 Feb 2007 08:54:04 WBPerson2970 Name_change: CGC_name: rpa-2 to rla-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rla
    Allele (32)
    Legacy_information: Orthologous to yeast (S.cerevisiae) acidic ribosomal protein P2 using blastP
    RNASeq_FPKM (74)
    GO_annotation: 00098510
      00098511
      00098512
      00112791
      00112792
      00112793
    Contained_in_operon: CEOP4542
    Ortholog (60)
    Paralog: WBGene00016493 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004408 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004409 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017347 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: rla-2 encodes an acidic ribosomal subunit protein P2. Curator_confirmed: WBPerson567
          Date_last_updated: 13 Jan 2012 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translational elongation. Predicted to be located in cytosolic ribosome. Predicted to be part of cytosolic large ribosomal subunit. Expressed in body wall musculature and intestine. Is an ortholog of human RPLP2 (ribosomal protein lateral stalk subunit P2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y62E10A.1
    Corresponding_transcript: Y62E10A.1.1
    Other_sequence (115)
    Associated_feature: WBsf652335
      WBsf231121
      WBsf231122
  Experimental_info: RNAi_result: WBRNAi00009403 Inferred_automatically: RNAi_primary
      WBRNAi00057839 Inferred_automatically: RNAi_primary
      WBRNAi00033324 Inferred_automatically: RNAi_primary
      WBRNAi00081653 Inferred_automatically: RNAi_primary
      WBRNAi00026885 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram618
      Expr415
      Expr7086
      Expr1015771
      Expr1032215
      Expr1161274
      Expr2015367
      Expr2033601
    Drives_construct: WBCnstr00002734
      WBCnstr00035507
    Construct_product: WBCnstr00035507
    Microarray_results (18)
    Expression_cluster (142)
    Interaction (26)
  Map_info: Map: IV Position: 8.73161 Error: 0.034473
    Positive: Positive_clone: Y62E10A Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00017806
    WBPaper00028360
    WBPaper00028381
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene