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WormBase Tree Display for Gene: WBGene00004513

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Name Class

WBGene00004513EvidenceCGC_data_submission
SMapS_parentSequenceF31C3
IdentityVersion1
NameCGC_namerrn-1.2
Sequence_nameF31C3.8
Molecular_nameF31C3.8
Other_namelet-209CGC_data_submission
CELE_F31C3.8Accession_evidenceNDBBX284601
Public_namerrn-1.2
DB_infoDatabaseNDBlocus_tagCELE_F31C3.8
NCBIgene13183158
RefSeqproteinNR_000054.1
RNAcentralURSidURS00005A42AA
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001637
Gene_classrrn
AlleleWBVar02123655
In_clusterrDNA_cluster
RNASeq_FPKM (74)
Structured_description (2)
Molecular_infoCorresponding_transcriptF31C3.8
Other_sequence (1838)
Experimental_infoRNAi_resultWBRNAi00000173Inferred_automaticallyRNAi_primary
Expression_cluster (36)
Map_infoMapIPosition30.0327
PositivePositive_cloneF31C3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00000696
WBPaper00016229
WBPaper00016267
WBPaper00064898
Remark18s ribosomal RNA
rrn-1 was previously used to designate the whole ribosomal DNA tandem array. Due to gene name assignment to each ribosomal RNA subunits within the cluster, the phenotypic descriptions, mapping data and allele information of rrn-1 have been attached to rDNA_cluster, which contains all the rrn lociCGC_data_submission
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene