WormBase Tree Display for Gene: WBGene00004682
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| WBGene00004682 | SMap | S_parent | Sequence | C34E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rsd-3 | Person_evidence | WBPerson490 | |||||
| Sequence_name | C34E11.1 | ||||||||
| Molecular_name | C34E11.1 | ||||||||
| C34E11.1.1 | |||||||||
| CE03062 | |||||||||
| Other_name | CELE_C34E11.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | rsd-3 | ||||||||
| DB_info | Database | AceView | gene | XM421 | |||||
| WormQTL | gene | WBGene00004682 | |||||||
| WormFlux | gene | WBGene00004682 | |||||||
| NDB | locus_tag | CELE_C34E11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004682|UniProtKB=Q18453 | |||||||
| family | PTHR12276 | ||||||||
| NCBI | gene | 181358 | |||||||
| RefSeq | protein | NM_077572.8 | |||||||
| TREEFAM | TREEFAM_ID | TF313361 | |||||||
| TrEMBL | UniProtAcc | Q18453 | |||||||
| UniProt_GCRP | UniProtAcc | Q18453 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rsd | ||||||||
| Allele (96) | |||||||||
| Strain | WBStrain00028989 | ||||||||
| WBStrain00028990 | |||||||||
| WBStrain00028992 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061288 | ||||||||
| 00061289 | |||||||||
| 00061290 | |||||||||
| 00061291 | |||||||||
| 00061292 | |||||||||
| 00061293 | |||||||||
| 00061294 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00001329 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable clathrin binding activity and phospholipid binding activity. Predicted to be involved in endocytosis. Predicted to be located in endosome and plasma membrane. Predicted to be part of clathrin vesicle coat. Expressed in several structures, including body wall musculature; coelomocyte; excretory canal; intestine; and pharynx. Is an ortholog of human CLINT1 (clathrin interactor 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34E11.1 | |||||||
| Corresponding_transcript | C34E11.1.1 | ||||||||
| Other_sequence | JI465008.1 | ||||||||
| JI165412.1 | |||||||||
| MH09492 | |||||||||
| AYC01201_1 | |||||||||
| JI470447.1 | |||||||||
| CBC11847_1 | |||||||||
| AE02307 | |||||||||
| Associated_feature | WBsf648574 | ||||||||
| WBsf663386 | |||||||||
| WBsf716630 | |||||||||
| WBsf716631 | |||||||||
| WBsf1007114 | |||||||||
| WBsf1007115 | |||||||||
| WBsf1007116 | |||||||||
| WBsf236421 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029531 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041899 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098487 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011608 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2833 | ||||||||
| Expr12959 | |||||||||
| Expr12960 | |||||||||
| Expr1018182 | |||||||||
| Expr1032316 | |||||||||
| Expr1145907 | |||||||||
| Expr2015550 | |||||||||
| Expr2033785 | |||||||||
| Drives_construct | WBCnstr00010977 | ||||||||
| WBCnstr00035433 | |||||||||
| WBCnstr00038381 | |||||||||
| Construct_product | WBCnstr00035433 | ||||||||
| WBCnstr00038379 | |||||||||
| WBCnstr00038381 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | X | Position | 6.73103 | Error | 0.001789 | |||
| Positive | Positive_clone | C34E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4875 | |||||||
| 5553 | |||||||||
| 5571 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006323 | ||||||||
| WBPaper00017775 | |||||||||
| WBPaper00025129 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049720 | |||||||||
| WBPaper00051895 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058174 | |||||||||
| WBPaper00063147 | |||||||||
| WBPaper00065648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
