WormBase Tree Display for Gene: WBGene00004906
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| WBGene00004906 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | snf-7 | Person_evidence | WBPerson508 | |||||
| Sequence_name | ZK1010.9 | ||||||||
| Molecular_name | ZK1010.9 | ||||||||
| ZK1010.9.1 | |||||||||
| CE43367 | |||||||||
| Other_name | CELE_ZK1010.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | snf-7 | ||||||||
| DB_info | Database | AceView | gene | 3O99 | |||||
| WormQTL | gene | WBGene00004906 | |||||||
| WormFlux | gene | WBGene00004906 | |||||||
| NDB | locus_tag | CELE_ZK1010.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004906|UniProtKB=G5EE39 | |||||||
| family | PTHR11616 | ||||||||
| NCBI | gene | 176723 | |||||||
| RefSeq | protein | NM_067301.4 | |||||||
| TREEFAM | TREEFAM_ID | TF343150 | |||||||
| TrEMBL | UniProtAcc | G5EE39 | |||||||
| UniProt_GCRP | UniProtAcc | G5EE39 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | snf | ||||||||
| Allele (108) | |||||||||
| Strain | WBStrain00031444 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00015372 | ||||||||
| 00015373 | |||||||||
| 00015374 | |||||||||
| 00015375 | |||||||||
| 00015376 | |||||||||
| 00015377 | |||||||||
| 00113315 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of human SLC6A7 (solute carrier family 6 member 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1010.9 | |||||||
| Corresponding_CDS_history | ZK1010.9:wp197 | ||||||||
| Corresponding_transcript | ZK1010.9.1 | ||||||||
| Associated_feature | WBsf659675 | ||||||||
| WBsf994780 | |||||||||
| WBsf994781 | |||||||||
| WBsf225956 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006097 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021772 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001516 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038113 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059042 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028874 | ||||||||
| Expr1162471 | |||||||||
| Expr2015951 | |||||||||
| Expr2034186 | |||||||||
| Drives_construct | WBCnstr00035331 | ||||||||
| Construct_product | WBCnstr00035331 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | III | Position | 20.7196 | Error | 0.004153 | |||
| Positive | Positive_clone | ZK1010 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4675 | |||||||
| 4768 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00015781 | ||||||||
| WBPaper00043908 | |||||||||
| WBPaper00045213 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Rand JB] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
