WormBase Tree Display for Gene: WBGene00005038
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| WBGene00005038 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F44F4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-12 | Person_evidence | WBPerson42 | |||||
| Sequence_name | F44F4.7 | ||||||||
| Molecular_name | F44F4.7 | ||||||||
| F44F4.7.1 | |||||||||
| CE30668 | |||||||||
| Other_name | CELE_F44F4.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sra-12 | ||||||||
| DB_info | Database | AceView | gene | 2L190 | |||||
| WormQTL | gene | WBGene00005038 | |||||||
| WormFlux | gene | WBGene00005038 | |||||||
| NDB | locus_tag | CELE_F44F4.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005038|UniProtKB=Q20410 | |||||||
| family | PTHR31357 | ||||||||
| NCBI | gene | 3565216 | |||||||
| RefSeq | protein | NM_063945.6 | |||||||
| SwissProt | UniProtAcc | Q20410 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | Q20410 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (41) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. sra-10,11,12 clustered. [Troemel et al. 1995; CX] | ||||||||
| Strain | WBStrain00033342 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (34) | |||||||||
| Paralog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. Expressed in ASJL; ASJR; ASKL; and ASKR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44F4.7 | |||||||
| Corresponding_CDS_history | F44F4.7:wp78 | ||||||||
| Corresponding_transcript | F44F4.7.1 | ||||||||
| Other_sequence | AY037792 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00000777 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014958 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047326 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15412 | ||||||||
| Expr1016031 | |||||||||
| Expr1151177 | |||||||||
| Expr2016129 | |||||||||
| Expr2034364 | |||||||||
| Drives_construct | WBCnstr00035249 | ||||||||
| Construct_product | WBCnstr00035249 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (25) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | II | Position | 3.13265 | |||||
| Positive | Positive_clone | F44F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00005030 | |||||||||
| WBPaper00005965 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00024667 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (3.13223) | |||||||||
| Method | Gene |
