WormBase Tree Display for Gene: WBGene00005043
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| WBGene00005043 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F28C12 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-17 | Person_evidence | WBPerson42 | |||||
| Sequence_name | F28C12.1 | ||||||||
| Molecular_name | F28C12.1 | ||||||||
| F28C12.1.1 | |||||||||
| CE33385 | |||||||||
| Other_name | CELE_F28C12.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | sra-17 | ||||||||
| DB_info | Database | AceView | gene | 1N279 | |||||
| WormQTL | gene | WBGene00005043 | |||||||
| WormFlux | gene | WBGene00005043 | |||||||
| NDB | locus_tag | CELE_F28C12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005043|UniProtKB=O17842 | |||||||
| family | PTHR31582 | ||||||||
| NCBI | gene | 185053 | |||||||
| RefSeq | protein | NM_060811.2 | |||||||
| SwissProt | UniProtAcc | O17842 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | O17842 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (81) | |||||||||
| Strain | WBStrain00033338 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030805 | ||||||||
| 00030806 | |||||||||
| 00030807 | |||||||||
| 00113485 | |||||||||
| 00113486 | |||||||||
| 00113487 | |||||||||
| Ortholog (13) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in ASIL; ASIR; AWAL; AWAR; and neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28C12.1 | |||||||
| Corresponding_CDS_history | F28C12.1:wp95 | ||||||||
| Corresponding_transcript | F28C12.1.1 | ||||||||
| Associated_feature | WBsf985661 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00003510 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045805 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5894 | ||||||||
| Expr11760 | |||||||||
| Expr14003 | |||||||||
| Expr1023506 | |||||||||
| Expr1149716 | |||||||||
| Expr2016132 | |||||||||
| Expr2034367 | |||||||||
| Drives_construct | WBCnstr00003242 | ||||||||
| WBCnstr00035246 | |||||||||
| Construct_product | WBCnstr00035246 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (31) | |||||||||
| SAGE_tag | SAGE:ttatttgtaa | Strand | Antisense | ||||||
| SAGE:gctttgaccataccctc | Strand | Antisense | |||||||
| Interaction (38) | |||||||||
| Map_info | Map | I | Position | 13.9303 | Error | 0.002825 | |||
| Positive | Positive_clone | F28C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024667 | ||||||||
| WBPaper00032528 | |||||||||
| WBPaper00061836 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
