WormBase Tree Display for Gene: WBGene00005049
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| WBGene00005049 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T06G6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-23 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T06G6.1 | ||||||||
| Molecular_name | T06G6.1 | ||||||||
| T06G6.1.1 | |||||||||
| CE13333 | |||||||||
| Other_name | CELE_T06G6.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | sra-23 | ||||||||
| DB_info | Database | AceView | gene | 1N293 | |||||
| WormQTL | gene | WBGene00005049 | |||||||
| WormFlux | gene | WBGene00005049 | |||||||
| NDB | locus_tag | CELE_T06G6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005049|UniProtKB=O62367 | |||||||
| family | PTHR31582 | ||||||||
| NCBI | gene | 188194 | |||||||
| RefSeq | protein | NM_060818.1 | |||||||
| SwissProt | UniProtAcc | O62367 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | O62367 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (42) | |||||||||
| Strain | WBStrain00001980 | ||||||||
| WBStrain00002614 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037755 | ||||||||
| 00037756 | |||||||||
| 00037757 | |||||||||
| 00113500 | |||||||||
| 00113501 | |||||||||
| 00113502 | |||||||||
| Ortholog (13) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in PQR; head; and neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06G6.1 | |||||||
| Corresponding_transcript | T06G6.1.1 | ||||||||
| Associated_feature | WBsf985662 | ||||||||
| WBsf1010950 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004149 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052679 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1427 | ||||||||
| Expr6623 | |||||||||
| Expr6624 | |||||||||
| Expr14004 | |||||||||
| Expr1024383 | |||||||||
| Expr1156285 | |||||||||
| Expr2034371 | |||||||||
| Drives_construct | WBCnstr00002764 | ||||||||
| WBCnstr00004409 | |||||||||
| WBCnstr00035241 | |||||||||
| Construct_product | WBCnstr00035241 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster | WBPaper00037950:intestine_L2-larva_expressed | ||||||||
| WBPaper00050488:adult_vs_dauer_regulated_N2_20C | |||||||||
| WBPaper00061527:sre-33-ZK1025.1_8337 | |||||||||
| cgc4489_group_18 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| WBPaper00041267:SpaceFlight_Upregulated | |||||||||
| [cgc6390]:intrinsic | |||||||||
| SAGE_tag | SAGE:catcaatact | Strand | Sense | ||||||
| SAGE:tggtagtattttgactt | Strand | Antisense | |||||||
| Interaction (16) | |||||||||
| Map_info | Map | I | Position | 13.949 | Error | 0.000985 | |||
| Positive | Positive_clone | T06G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024667 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
