WormBase Tree Display for Gene: WBGene00005073
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| WBGene00005073 | SMap | S_parent | Sequence | F37C12 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | srb-8 | Person_evidence | WBPerson42 | ||||||
| Sequence_name | F37C12.15 | |||||||||
| Molecular_name | F37C12.15 | |||||||||
| Other_name | CELE_F37C12.15 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | srb-8 | |||||||||
| DB_info | Database | AceView | gene | 3I261 | ||||||
| WormQTL | gene | WBGene00005073 | ||||||||
| WormFlux | gene | WBGene00005073 | ||||||||
| NDB | locus_tag | CELE_F37C12.15 | ||||||||
| NCBI | gene | 191790 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 20 Jan 2020 12:15:58 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srb | |||||||||
| Allele | WBVar01500260 | |||||||||
| WBVar02121754 | ||||||||||
| WBVar02120848 | ||||||||||
| WBVar01499774 | ||||||||||
| WBVar02120683 | ||||||||||
| WBVar01499237 | ||||||||||
| WBVar02124958 | ||||||||||
| WBVar02122566 | ||||||||||
| WBVar02122238 | ||||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. srb-7,8,9 clustered. [Troemel et al. 1995; CX] | |||||||||
| Strain | WBStrain00003151 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00152428 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00123029 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| WBGene00085195 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog (42) | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-12; lin-4; and lin-14 based on tiling array and microarray studies. Is affected by five chemicals including resveratrol; Atrazine; and Chlorpyrifos based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F37C12.15:wp101 | ||||||||
| F37C12.15:wp275 | ||||||||||
| Corresponding_pseudogene | F37C12.15 | |||||||||
| Experimental_info | Expr_pattern | Expr5981 | ||||||||
| Expr1022934 | ||||||||||
| Expr1150492 | ||||||||||
| Expr2016188 | ||||||||||
| Expr2034415 | ||||||||||
| Drives_construct | WBCnstr00003629 | |||||||||
| WBCnstr00035218 | ||||||||||
| Construct_product | WBCnstr00035218 | |||||||||
| Microarray_results (22) | ||||||||||
| Expression_cluster (16) | ||||||||||
| Interaction (30) | ||||||||||
| Map_info | Map | III | Position | -0.777427 | Error | 0.000157 | ||||
| Positive | Positive_clone | F37C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00002314 | |||||||||
| WBPaper00015440 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
