WormBase Tree Display for Gene: WBGene00005103
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WBGene00005103 | Evidence | Person_evidence | WBPerson522 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F07C4 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | srd-25 | Person_evidence | WBPerson522 | |||||
Sequence_name | F07C4.4 | ||||||||
Molecular_name | F07C4.4 | ||||||||
F07C4.4.1 | |||||||||
CE09203 | |||||||||
Other_name | CELE_F07C4.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | srd-25 | ||||||||
DB_info | Database | AceView | gene | 5I111 | |||||
WormQTL | gene | WBGene00005103 | |||||||
WormFlux | gene | WBGene00005103 | |||||||
NDB | locus_tag | CELE_F07C4.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00005103|UniProtKB=P91210 | |||||||
family | PTHR22945 | ||||||||
NCBI | gene | 191811 | |||||||
RefSeq | protein | NM_072572.1 | |||||||
SwissProt | UniProtAcc | P91210 | |||||||
TREEFAM | TREEFAM_ID | TF316515 | |||||||
UniProt_GCRP | UniProtAcc | P91210 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srd | ||||||||
Allele (55) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00050317 | ||||||||
00050318 | |||||||||
Ortholog (16) | |||||||||
Paralog (68) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F07C4.4 | |||||||
Corresponding_transcript | F07C4.4.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00043891 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012816 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022860 | ||||||||
Expr1147866 | |||||||||
Drives_construct | WBCnstr00035199 | ||||||||
Construct_product | WBCnstr00035199 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (14) | |||||||||
SAGE_tag | SAGE:attttgagtg | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:tttggctgtt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:cagtgatgaa | Strand | Antisense | |||||||
SAGE:gaaggaatga | Strand | Antisense | |||||||
SAGE:atttttggag | Strand | Antisense | |||||||
SAGE:ttctcccctt | Strand | Antisense | |||||||
SAGE:aacgcgtttg | Strand | Antisense | |||||||
SAGE:ttttctccag | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (70) | |||||||||
Map_info | Map | V | Position | 0.821292 | Error | 0.000249 | |||
Positive | Positive_clone | F07C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00063938 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |