WormBase Tree Display for Gene: WBGene00005175
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| WBGene00005175 | SMap | S_parent | Sequence | T01B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-18 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T01B7.2 | ||||||||
| Molecular_name | T01B7.2 | ||||||||
| Other_name | CELE_T01B7.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | srg-18 | ||||||||
| DB_info | Database | AceView | gene | 2J0 | |||||
| WormQTL | gene | WBGene00005175 | |||||||
| NDB | locus_tag | CELE_T01B7.2 | |||||||
| NCBI | gene | 13186213 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | srg | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00005174 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Enriched in DA neuron; I5 neuron; SAB; VA neuron; and retrovesicular ganglion based on microarray studies. Is affected by clk-1; sir-2.1; and rrf-3 based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | T01B7.2:wp93 | |||||||
| Corresponding_pseudogene | T01B7.2 | ||||||||
| Experimental_info | Microarray_results | SMD_T01B7.1 | |||||||
| SMD_T01B7.2 | |||||||||
| 177623_at | |||||||||
| A_12_P140865 | |||||||||
| Aff_T01B7.2 | |||||||||
| GPL3518_CE03586 | |||||||||
| Expression_cluster | WBPaper00045774:clk-1_upregulated | ||||||||
| WBPaper00061527:srj-21-srh-32 | |||||||||
| cgc4489_group_11 | |||||||||
| WBPaper00025032:cluster_84 | |||||||||
| WBPaper00025141:unc-4::GFP_Enriched_Genes | |||||||||
| WBPaper00025141:unc-4::GFP_Expressed_Genes | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| WBPaper00027111:rrf-3(pk1426)_upregulated | |||||||||
| WBPaper00030839:Embryo_A_Class | |||||||||
| [cgc6390]:mixed_oogenesis-somatic | |||||||||
| Map_info | Map | II | Position | 0.855912 | Error | 0.001388 | |||
| Positive | Positive_clone | T01B7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
