WormBase Tree Display for Gene: WBGene00005204
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| WBGene00005204 | SMap | S_parent | Sequence | C53A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-47 | Person_evidence | WBPerson42 | |||||
| Sequence_name | C53A5.8 | ||||||||
| Molecular_name | C53A5.8 | ||||||||
| C53A5.8.1 | |||||||||
| CE33042 | |||||||||
| Other_name | CELE_C53A5.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srg-47 | ||||||||
| DB_info | Database | AceView | gene | 5P34 | |||||
| WormQTL | gene | WBGene00005204 | |||||||
| WormFlux | gene | WBGene00005204 | |||||||
| NDB | locus_tag | CELE_C53A5.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005204|UniProtKB=O17699 | |||||||
| family | PTHR31114 | ||||||||
| NCBI | gene | 183738 | |||||||
| RefSeq | protein | NM_074203.2 | |||||||
| SwissProt | UniProtAcc | O17699 | |||||||
| TREEFAM | TREEFAM_ID | TF315301 | |||||||
| UniProt_GCRP | UniProtAcc | O17699 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (68) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030472 | ||||||||
| 00030473 | |||||||||
| 00030474 | |||||||||
| 00113697 | |||||||||
| 00113698 | |||||||||
| 00113699 | |||||||||
| Ortholog (17) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Located in cilium. Expressed in ASIL and ASIR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53A5.8 | |||||||
| Corresponding_CDS_history | C53A5.8:wp93 | ||||||||
| Corresponding_transcript | C53A5.8.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012338 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043065 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9606 | ||||||||
| Expr1026662 | |||||||||
| Expr1147030 | |||||||||
| Expr2016339 | |||||||||
| Expr2034565 | |||||||||
| Drives_construct | WBCnstr00014168 | ||||||||
| WBCnstr00035124 | |||||||||
| WBCnstr00039933 | |||||||||
| WBCnstr00042108 | |||||||||
| Construct_product | WBCnstr00035124 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (22) | |||||||||
| Interaction (52) | |||||||||
| Map_info | Map | V | Position | 6.48096 | Error | 0.003032 | |||
| Positive | Positive_clone | C53A5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00059838 | ||||||||
| WBPaper00066057 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
