WormBase Tree Display for Gene: WBGene00005207
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| WBGene00005207 | SMap | S_parent | Sequence | Y43B11AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-50 | Person_evidence | WBPerson42 | |||||
| Sequence_name | Y43B11AR.2 | ||||||||
| Molecular_name | Y43B11AR.2 | ||||||||
| Y43B11AR.2.1 | |||||||||
| CE33338 | |||||||||
| Other_name | Y43B11AR.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y43B11AR.2 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | srg-50 | ||||||||
| DB_info | Database | AceView | gene | 4H836 | |||||
| WormQTL | gene | WBGene00005207 | |||||||
| WormFlux | gene | WBGene00005207 | |||||||
| NDB | locus_tag | CELE_Y43B11AR.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005207|UniProtKB=Q9N3X5 | |||||||
| family | PTHR31114 | ||||||||
| NCBI | gene | 189847 | |||||||
| RefSeq | protein | NM_068699.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315301 | |||||||
| TrEMBL | UniProtAcc | Q9N3X5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3X5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00094071 | ||||||||
| 00094072 | |||||||||
| 00113703 | |||||||||
| 00113704 | |||||||||
| 00113705 | |||||||||
| Ortholog (11) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y43B11AR.2 | |||||||
| Corresponding_CDS_history | Y43B11AR.2:wp93 | ||||||||
| Y43B11AR.2:wp240 | |||||||||
| Corresponding_transcript | Y43B11AR.2.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00056457 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1159929 | ||||||||
| Expr2016342 | |||||||||
| Expr2034568 | |||||||||
| Drives_construct | WBCnstr00035123 | ||||||||
| Construct_product | WBCnstr00035123 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (28) | |||||||||
| Map_info | Map | IV | Position | 3.28742 | Error | 0.000415 | |||
| Positive | Positive_clone | Y43B11AR | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
