WormBase Tree Display for Gene: WBGene00005228
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| WBGene00005228 | SMap | S_parent | Sequence | C05E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-2 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C05E4.14 | ||||||||
| Molecular_name (33) | |||||||||
| Other_name | CELE_C05E4.14 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-2 | ||||||||
| DB_info | Database | AceView | gene | 5B211 | |||||
| WormQTL | gene | WBGene00005228 | |||||||
| WormFlux | gene | WBGene00005228 | |||||||
| NDB | locus_tag | CELE_C05E4.14 | |||||||
| Panther | gene | CAEEL|WormBase=C05E4.14e|UniProtKB=A0A0K3ART6 | |||||||
| family | PTHR47405 | ||||||||
| NCBI | gene | 178584 | |||||||
| RefSeq | protein | NM_001313114.1 | |||||||
| NM_001026193.4 | |||||||||
| NM_001313117.1 | |||||||||
| NM_001313112.1 | |||||||||
| NM_001313118.1 | |||||||||
| NM_001392470.1 | |||||||||
| NM_001380592.1 | |||||||||
| NM_001313113.1 | |||||||||
| NM_001313115.1 | |||||||||
| NM_001313116.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF342964 | |||||||
| TrEMBL | UniProtAcc | E4MVC8 | |||||||
| A0A0K3AUP8 | |||||||||
| H2KYH0 | |||||||||
| A0A0K3AVB8 | |||||||||
| A0A0K3AUP2 | |||||||||
| A0A0K3AXL3 | |||||||||
| H2KYG9 | |||||||||
| A0A0K3ARU0 | |||||||||
| A0A0K3ART6 | |||||||||
| A0A0K3ASA1 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3ART6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (265) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000863 | ||||||||
| Ortholog (18) | |||||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in several structures, including Eala; Ealp; Eara; Earp; and intestine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C05E4.14a | |||||||
| C05E4.14b | |||||||||
| C05E4.14c | |||||||||
| C05E4.14d | |||||||||
| C05E4.14e | |||||||||
| C05E4.14f | |||||||||
| C05E4.14g | |||||||||
| C05E4.14h | |||||||||
| C05E4.14i | |||||||||
| C05E4.14j | |||||||||
| Corresponding_CDS_history | C05E4.14:wp126 | ||||||||
| C05E4.14:wp138 | |||||||||
| C05E4.14a:wp221 | |||||||||
| C05E4.14b:wp216 | |||||||||
| Corresponding_transcript (13) | |||||||||
| Associated_feature | WBsf646645 | ||||||||
| WBsf646646 | |||||||||
| WBsf661106 | |||||||||
| WBsf661107 | |||||||||
| WBsf661108 | |||||||||
| WBsf999199 | |||||||||
| WBsf999200 | |||||||||
| WBsf999201 | |||||||||
| WBsf1019102 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039781 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1585 | ||||||||
| Expr1610 | |||||||||
| Expr1026530 | |||||||||
| Expr1143867 | |||||||||
| Expr2016477 | |||||||||
| Expr2034679 | |||||||||
| Drives_construct | WBCnstr00035106 | ||||||||
| Construct_product | WBCnstr00035106 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (167) | |||||||||
| Map_info | Map | V | Position | -19.9585 | |||||
| Positive | Positive_clone | C05E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00061747 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
