WormBase Tree Display for Gene: WBGene00005434
expand all nodes | collapse all nodes | view schema
| WBGene00005434 | SMap | S_parent | Sequence | C35D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-224 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C35D6.8 | ||||||||
| Molecular_name | C35D6.8 | ||||||||
| Other_name | CELE_C35D6.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | srh-224 | ||||||||
| DB_info | Database | AceView | gene | 4R97 | |||||
| NDB | locus_tag | CELE_C35D6.8 | |||||||
| NCBI | gene | 13208734 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | srh | ||||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00015315 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| WBGene00005453 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Is affected by sir-2.1 based on microarray studies. Is affected by Rifampin and allantoin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_pseudogene | C35D6.8 | |||||||
| Experimental_info | Microarray_results | SMD_C35D6.1 | |||||||
| A_12_P138305 | |||||||||
| A_12_P138306 | |||||||||
| GPL19516_CGZ0007818 | |||||||||
| GPL21109_C35D6.51 | |||||||||
| GPL21109_C35D6.76 | |||||||||
| GPL21109_C35D6.8 | |||||||||
| Expression_cluster | WBPaper00055354:Rifampicin-Allantoin_upregulated | ||||||||
| cgc4489_group_18 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| Map_info | Map | IV | Position | 15.0472 | Error | 0.002776 | |||
| Positive | Positive_clone | C35D6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
