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WormBase Tree Display for Gene: WBGene00005438

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Name Class

WBGene00005438SMapS_parentSequenceC04F2
IdentityVersion1
NameCGC_namesrh-230Person_evidenceWBPerson522
Sequence_nameC04F2.3
Molecular_nameC04F2.3
Other_nameCELE_C04F2.3Accession_evidenceNDBBX284605
Public_namesrh-230
DB_infoDatabaseAceViewgene5H982
NDBlocus_tagCELE_C04F2.3
NCBIgene13213681
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:38WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0000336
Gene_classsrh
Allele (23)
RNASeq_FPKM (74)
ParalogWBGene00005437Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionEnriched in ADL; ASH; and PHA based on single-cell RNA-seq studies. Is affected by several genes including daf-12; hpl-2; and dpy-21 based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_pseudogeneC04F2.3
Experimental_infoMicroarray_resultsA_12_P134925
A_12_P134926
GPL19516_CGZ0002371
GPL21109_C04F2.3
Expression_cluster (16)
Map_infoMapVPosition0.753273
PositivePositive_cloneC04F2Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene