WormBase Tree Display for Gene: WBGene00005494
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| WBGene00005494 | SMap | S_parent | Sequence | C47A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-290 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C47A10.11 | ||||||||
| Molecular_name | C47A10.11 | ||||||||
| C47A10.11.1 | |||||||||
| CE34475 | |||||||||
| Other_name | CELE_C47A10.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-290 | ||||||||
| DB_info | Database | AceView | gene | 5S265 | |||||
| WormQTL | gene | WBGene00005494 | |||||||
| WormFlux | gene | WBGene00005494 | |||||||
| NDB | locus_tag | CELE_C47A10.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005494|UniProtKB=Q7YTT5 | |||||||
| family | PTHR22941 | ||||||||
| NCBI | gene | 3565277 | |||||||
| RefSeq | protein | NM_001028541.1 | |||||||
| TrEMBL | UniProtAcc | Q7YTT5 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTT5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (72) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082605 | ||||||||
| Ortholog | WBGene00063793 | Caenorhabditis remanei | From_analysis | OMA | |||||
| TreeFam | |||||||||
| WBGene00063738 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| WBGene00086254 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| CSP29.g12131 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP39.g24702 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17551 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (298) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C47A10.11 | |||||||
| Corresponding_transcript | C47A10.11.1 | ||||||||
| Associated_feature | WBsf1002745 | ||||||||
| WBsf1021345 | |||||||||
| Experimental_info | Expr_pattern | Expr1023627 | |||||||
| Expr1146622 | |||||||||
| Expr2016474 | |||||||||
| Drives_construct | WBCnstr00034931 | ||||||||
| Construct_product | WBCnstr00034931 | ||||||||
| Microarray_results | A_12_P101300 | ||||||||
| GPL14144_C47A10.11_779-838_0.960_1_A | |||||||||
| GPL19516_CGZ0009294 | |||||||||
| GPL21109_C47A10.11 | |||||||||
| GPL8304_CE_WBGene00005494_A | |||||||||
| GPL8304_CE_WBGene00005494_B | |||||||||
| GPL8673_C47A10_11P00535 | |||||||||
| GPL8673_C47A10_11P00744 | |||||||||
| GPL8673_C47A10_11P00878 | |||||||||
| Expression_cluster (20) | |||||||||
| Map_info | Map | V | Position | 13.2027 | Error | 0.000446 | |||
| Positive | Positive_clone | C47A10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026594 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
