WormBase Tree Display for Gene: WBGene00005551
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WBGene00005551 | Evidence | Person_evidence | WBPerson522 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F33H12 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | sri-39 | Person_evidence | WBPerson522 | |||||
Sequence_name | F33H12.2 | ||||||||
Molecular_name | F33H12.2 | ||||||||
F33H12.2.1 | |||||||||
CE41128 | |||||||||
Other_name | CELE_F33H12.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | sri-39 | ||||||||
DB_info | Database | AceView | gene | 2C873 | |||||
WormQTL | gene | WBGene00005551 | |||||||
WormFlux | gene | WBGene00005551 | |||||||
NDB | locus_tag | CELE_F33H12.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00005551|UniProtKB=O44842 | |||||||
family | PTHR45830 | ||||||||
NCBI | gene | 191913 | |||||||
RefSeq | protein | NM_061900.4 | |||||||
TREEFAM | TREEFAM_ID | TF315276 | |||||||
TrEMBL | UniProtAcc | O44842 | |||||||
UniProt_GCRP | UniProtAcc | O44842 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sri | ||||||||
Allele (99) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033513 | ||||||||
Ortholog | WBGene00068085 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00038740 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00148731 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00079240 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
CSP26.g17196 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP40.g3273 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g16988 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00222.g7402 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
GCK72_006881 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g3712 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (292) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F33H12.2 | |||||||
Corresponding_CDS_history | F33H12.2:wp97 | ||||||||
F33H12.2:wp176 | |||||||||
Corresponding_transcript | F33H12.2.1 | ||||||||
Associated_feature | WBsf986979 | ||||||||
WBsf1011732 | |||||||||
Experimental_info | RNAi_result | WBRNAi00046233 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012592 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043495 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr14100 | ||||||||
Expr1150121 | |||||||||
Expr2034744 | |||||||||
Drives_construct | WBCnstr00034890 | ||||||||
Construct_product | WBCnstr00034890 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (81) | |||||||||
Interaction | WBInteraction000235228 | ||||||||
WBInteraction000290405 | |||||||||
WBInteraction000300807 | |||||||||
WBInteraction000369017 | |||||||||
WBInteraction000410420 | |||||||||
Map_info | Map | II | Position | -12.3686 | Error | 0.010233 | |||
Positive | Positive_clone | F33H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |