WormBase Tree Display for Gene: WBGene00005931
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WBGene00005931 | SMap | S_parent | Sequence | T06E6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | fbxa-199 | Person_evidence | WBPerson655 | |||
Sequence_name | T06E6.3 | ||||||
Molecular_name | T06E6.3 | ||||||
T06E6.3.1 | |||||||
CE40779 | |||||||
Other_name | srx-40 | Person_evidence | WBPerson522 | ||||
CELE_T06E6.3 | Accession_evidence | NDB | BX284605 | ||||
Public_name | fbxa-199 | ||||||
DB_info | Database | AceView | gene | 5P878 | |||
WormQTL | gene | WBGene00005931 | |||||
WormFlux | gene | WBGene00005931 | |||||
NDB | locus_tag | CELE_T06E6.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00005931|UniProtKB=O45758 | |||||
family | PTHR23017 | ||||||
NCBI | gene | 188182 | |||||
RefSeq | protein | NM_074426.3 | |||||
TREEFAM | TREEFAM_ID | TF315574 | |||||
TrEMBL | UniProtAcc | O45758 | |||||
UniProt_GCRP | UniProtAcc | O45758 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Split_into | WBGene00044759 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxa | ||||||
Allele (33) | |||||||
Strain | WBStrain00055318 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00035157 | ||||||
Ortholog (54) | |||||||
Paralog (96) | |||||||
Structured_description | Concise_description | srx-40 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T06E6.3 | |||||
Corresponding_CDS_history | T06E6.3:wp155 | ||||||
T06E6.3:wp172 | |||||||
Corresponding_transcript | T06E6.3.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00018309 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1018889 | ||||||
Expr1156273 | |||||||
Expr2011512 | |||||||
Expr2029749 | |||||||
Drives_construct | WBCnstr00034650 | ||||||
Construct_product | WBCnstr00034650 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (119) | |||||||
Interaction (12) | |||||||
Map_info | Map | V | Position | 8.03217 | Error | 0.011919 | |
Positive | Positive_clone | T06E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4246 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00012854 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |