WormBase Tree Display for Gene: WBGene00005961
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| WBGene00005961 | SMap | S_parent | Sequence | K07C6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | srx-70 | Person_evidence | WBPerson522 | ||||||
| Sequence_name | K07C6.15 | |||||||||
| Molecular_name | K07C6.15 | |||||||||
| Other_name | CELE_K07C6.15 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srx-70 | |||||||||
| DB_info | Database | AceView | gene | 5E404 | ||||||
| WormQTL | gene | WBGene00005961 | ||||||||
| NDB | locus_tag | CELE_K07C6.15 | ||||||||
| NCBI | gene | 13212436 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 16 Feb 2005 16:48:32 | WBPerson1849 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srx | |||||||||
| Allele (55) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00005957 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in DA neuron; I5 neuron; SAB; VA neuron; and retrovesicular ganglion based on microarray studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by Rifampin; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | K07C6.15:wp140 | ||||||||
| Corresponding_pseudogene | K07C6.15 | |||||||||
| Associated_feature | WBsf652553 | |||||||||
| Experimental_info | Microarray_results | SMD_K07C6.15 | ||||||||
| 188845_at | ||||||||||
| Aff_K07C6.15 | ||||||||||
| GPL19516_CGZ0028203 | ||||||||||
| GPL21109_K07C6.15 | ||||||||||
| Expression_cluster (19) | ||||||||||
| Map_info | Map | V | Position | -7.50321 | Error | 0.002534 | ||||
| Positive | Positive_clone | K07C6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
