WormBase Tree Display for Gene: WBGene00005987

WBGene00005987 SMap: S_parent: Sequence: T01D3
  Identity: Version: 1
    Name: CGC_name: srx-96 Person_evidence: WBPerson522
      Sequence_name: T01D3.4
      Molecular_name: T01D3.4a
        T01D3.4a.1
        CE51387
        T01D3.4b
      Other_name: CELE_T01D3.4 Accession_evidence: NDB BX284605
      Public_name: srx-96
    DB_info: Database: AceView gene 5O195
        WormQTL gene WBGene00005987
        WormFlux gene WBGene00005987
        NDB locus_tag CELE_T01D3.4
        Panther gene CAEEL|WormBase=WBGene00005987|UniProtKB=P90954
          family PTHR46611
        NCBI gene 187951
        RefSeq protein NM_073991.2
            NR_136387.1
        TrEMBL UniProtAcc P90954
        UniProt_GCRP UniProtAcc P90954
        RNAcentral URSid URS0000A4252E
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srx
    Allele (26)
    RNASeq_FPKM (74)
    GO_annotation: 00049581
    Ortholog: WBGene00159893 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00052861 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP28.g5214 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP32.g7068 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      FL83_03760 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018638 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrV_pilon.g16307 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00277612 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279384 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (94)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T01D3.4a
    Corresponding_CDS_history: T01D3.4:wp252
    Corresponding_transcript: T01D3.4b
      T01D3.4a.1
  Experimental_info: RNAi_result: WBRNAi00023563 Inferred_automatically: RNAi_primary
      WBRNAi00052125 Inferred_automatically: RNAi_primary
      WBRNAi00023803 Inferred_automatically: RNAi_primary
      WBRNAi00023293 Inferred_automatically: RNAi_primary
      WBRNAi00024091 Inferred_automatically: RNAi_primary
      WBRNAi00017970 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015941
      Expr1032531
      Expr1155757
      Expr2016861
      Expr2035029
    Microarray_results (14)
    Expression_cluster (24)
    SAGE_tag: SAGE:caaacttgaaaaatatt Strand: Antisense
    Interaction: WBInteraction000175162
      WBInteraction000397233
      WBInteraction000458896
  Map_info: Map: V Position: 5.58508 Error: 0.000237
    Positive: Positive_clone: T01D3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene