WormBase Tree Display for Gene: WBGene00006002
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| WBGene00006002 | SMap | S_parent | Sequence | T24E12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srx-111 | Person_evidence | WBPerson522 | |||||
| Sequence_name | T24E12.4 | ||||||||
| Molecular_name | T24E12.4 | ||||||||
| T24E12.4.1 | |||||||||
| CE35624 | |||||||||
| Other_name | CELE_T24E12.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | srx-111 | ||||||||
| DB_info | Database | AceView | gene | 2E49 | |||||
| WormQTL | gene | WBGene00006002 | |||||||
| WormFlux | gene | WBGene00006002 | |||||||
| NDB | locus_tag | CELE_T24E12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006002|UniProtKB=O44877 | |||||||
| family | PTHR46952 | ||||||||
| NCBI | gene | 188863 | |||||||
| RefSeq | protein | NM_062241.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315574 | |||||||
| TrEMBL | UniProtAcc | O44877 | |||||||
| UniProt_GCRP | UniProtAcc | O44877 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srx | ||||||||
| Allele (115) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033533 | ||||||||
| Ortholog (38) | |||||||||
| Paralog (94) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T24E12.4 | |||||||
| Corresponding_CDS_history | T24E12.4:wp107 | ||||||||
| Corresponding_transcript | T24E12.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00035928 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022453 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054067 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014817 | ||||||||
| Expr1157611 | |||||||||
| Expr2016803 | |||||||||
| Expr2034978 | |||||||||
| Drives_construct | WBCnstr00034603 | ||||||||
| Construct_product | WBCnstr00034603 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (38) | |||||||||
| SAGE_tag | SAGE:ccgtcacaga | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgtatataat | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgcattaata | Strand | Antisense | |||||||
| SAGE:tgtatataattgtataa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gaagctggtt | Strand | Antisense | |||||||
| Interaction (11) | |||||||||
| Map_info | Map | II | Position | -6.21204 | Error | 0.000348 | |||
| Positive | Positive_clone | T24E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
