WormBase Tree Display for Gene: WBGene00006024
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| WBGene00006024 | SMap | S_parent | Sequence | F09F3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srx-133 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F09F3.4 | ||||||||
| Molecular_name | F09F3.4 | ||||||||
| F09F3.4.1 | |||||||||
| CE36289 | |||||||||
| Other_name | CELE_F09F3.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srx-133 | ||||||||
| DB_info | Database | AceView | gene | 5O325 | |||||
| WormQTL | gene | WBGene00006024 | |||||||
| WormFlux | gene | WBGene00006024 | |||||||
| NDB | locus_tag | CELE_F09F3.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006024|UniProtKB=P90819 | |||||||
| family | PTHR46611 | ||||||||
| NCBI | gene | 184252 | |||||||
| RefSeq | protein | NM_074030.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315574 | |||||||
| TrEMBL | UniProtAcc | P90819 | |||||||
| UniProt_GCRP | UniProtAcc | P90819 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srx | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00049127 | ||||||||
| Ortholog (16) | |||||||||
| Paralog (94) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09F3.4 | |||||||
| Corresponding_CDS_history | F09F3.4:wp117 | ||||||||
| Corresponding_transcript | F09F3.4.1 | ||||||||
| Associated_feature | WBsf1001900 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044147 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012994 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026739 | ||||||||
| Expr1148115 | |||||||||
| Expr2016816 | |||||||||
| Expr2034988 | |||||||||
| Drives_construct | WBCnstr00034586 | ||||||||
| Construct_product | WBCnstr00034586 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (14) | |||||||||
| SAGE_tag | SAGE:gtcaagagta | Strand | Antisense | ||||||
| SAGE:ataaattaca | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tttttcaaca | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaaatgggtc | Strand | Antisense | |||||||
| SAGE:tattttccat | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gtttcaatta | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:atgataactc | Strand | Antisense | |||||||
| Interaction (83) | |||||||||
| Map_info | Map | V | Position | 5.6909 | Error | 0.000417 | |||
| Positive | Positive_clone | F09F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
