WormBase Tree Display for Gene: WBGene00006078
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| WBGene00006078 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | str-10 | Person_evidence | WBPerson42 | |||||
| Sequence_name | R03G8.5 | ||||||||
| Molecular_name | R03G8.5a | ||||||||
| R03G8.5a.1 | |||||||||
| CE51266 | |||||||||
| R03G8.5b | |||||||||
| CE51348 | |||||||||
| R03G8.5b.1 | |||||||||
| Other_name | CELE_R03G8.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | str-10 | ||||||||
| DB_info | Database | AceView | gene | XN701 | |||||
| WormQTL | gene | WBGene00006078 | |||||||
| WormFlux | gene | WBGene00006078 | |||||||
| NDB | locus_tag | CELE_R03G8.5 | |||||||
| Panther | gene | CAEEL|Gene_ORFName=CELE_R03G8.5|UniProtKB=A0A131MBU5 | |||||||
| family | PTHR46000 | ||||||||
| NCBI | gene | 187547 | |||||||
| RefSeq | protein | NM_001322638.1 | |||||||
| NM_001322639.1 | |||||||||
| TrEMBL | UniProtAcc | A0A131MBA3 | |||||||
| A0A131MBU5 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A131MBU5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | str | ||||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001982 | ||||||||
| Ortholog (44) | |||||||||
| Paralog (267) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R03G8.5a | |||||||
| R03G8.5b | |||||||||
| Corresponding_CDS_history | R03G8.5:wp252 | ||||||||
| Corresponding_transcript | R03G8.5a.1 | ||||||||
| R03G8.5b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051194 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017366 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016644 | ||||||||
| Expr1154901 | |||||||||
| Drives_construct | WBCnstr00034552 | ||||||||
| Construct_product | WBCnstr00034552 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (13) | |||||||||
| SAGE_tag | SAGE:ttaacgatag | Strand | Antisense | ||||||
| SAGE:tttggattaa | Strand | Antisense | |||||||
| SAGE:gaaaagtcgg | Strand | Antisense | |||||||
| SAGE:tcttttatta | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (90) | |||||||||
| Map_info | Map | X | Position | 10.2071 | |||||
| Positive | Positive_clone | R03G8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
