WormBase Tree Display for Gene: WBGene00006102
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WBGene00006102 | SMap | S_parent | Sequence | C50B6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | str-37 | Person_evidence | WBPerson42 | |||||
Sequence_name | C50B6.12 | ||||||||
Molecular_name | C50B6.12 | ||||||||
C50B6.12.1 | |||||||||
CE15728 | |||||||||
Other_name | CELE_C50B6.12 | Accession_evidence | NDB | BX284605 | |||||
Public_name | str-37 | ||||||||
DB_info | Database | AceView | gene | 5N811 | |||||
WormQTL | gene | WBGene00006102 | |||||||
WormFlux | gene | WBGene00006102 | |||||||
NDB | locus_tag | CELE_C50B6.12 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006102|UniProtKB=O17691 | |||||||
family | PTHR46000 | ||||||||
NCBI | gene | 183639 | |||||||
RefSeq | protein | NM_073903.2 | |||||||
TrEMBL | UniProtAcc | O17691 | |||||||
UniProt_GCRP | UniProtAcc | O17691 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | str | ||||||||
Allele (23) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00030390 | ||||||||
Ortholog (23) | |||||||||
Paralog (269) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C50B6.12 | |||||||
Corresponding_transcript | C50B6.12.1 | ||||||||
Associated_feature | WBsf232757 | ||||||||
Experimental_info | RNAi_result | WBRNAi00042849 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030007 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012174 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026121 | ||||||||
Expr1146827 | |||||||||
Expr2017062 | |||||||||
Expr2035199 | |||||||||
Drives_construct | WBCnstr00034538 | ||||||||
Construct_product | WBCnstr00034538 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (17) | |||||||||
SAGE_tag | SAGE:tgcaaatgat | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:ttgattatca | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tattttctaa | Strand | Antisense | |||||||
SAGE:catccgagga | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tgatataaaa | Strand | Antisense | |||||||
SAGE:catccgaggaatttaca | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (87) | |||||||||
Map_info | Map | V | Position | 5.14207 | Error | 0.002872 | |||
Positive | Positive_clone | C50B6 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |