WormBase Tree Display for Gene: WBGene00006126
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WBGene00006126 | SMap | S_parent | Sequence | C17B7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | str-63 | Person_evidence | WBPerson42 | |||||
Sequence_name | C17B7.1 | ||||||||
Molecular_name | C17B7.1 | ||||||||
C17B7.1.1 | |||||||||
CE16849 | |||||||||
Other_name | CELE_C17B7.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | str-63 | ||||||||
DB_info | Database | AceView | gene | 5D831 | |||||
WormQTL | gene | WBGene00006126 | |||||||
WormFlux | gene | WBGene00006126 | |||||||
NDB | locus_tag | CELE_C17B7.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006126|UniProtKB=O45161 | |||||||
family | PTHR46178 | ||||||||
NCBI | gene | 191981 | |||||||
RefSeq | protein | NM_071530.1 | |||||||
TrEMBL | UniProtAcc | O45161 | |||||||
UniProt_GCRP | UniProtAcc | O45161 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | str | ||||||||
Allele (75) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033956 | ||||||||
Ortholog | WBGene00143812 | Caenorhabditis brenneri | From_analysis | OMA | |||||
WBGene00153998 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
WormBase-Compara | |||||||||
WBGene00146309 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00082047 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00116958 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
Csp5_scaffold_01200.g19196 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_12629 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_020742 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g13722 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (267) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C17B7.1 | |||||||
Corresponding_transcript | C17B7.1.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00010887 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040759 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054351 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020464 | ||||||||
Expr1144798 | |||||||||
Drives_construct | WBCnstr00034523 | ||||||||
Construct_product | WBCnstr00034523 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (20) | |||||||||
SAGE_tag | SAGE:cggagaatat | Strand | Antisense | ||||||
SAGE:tgacactaaa | Strand | Antisense | |||||||
SAGE:aaaaaggagc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (63) | |||||||||
Map_info | Map | V | Position | -12.0795 | Error | 0.017177 | |||
Positive | Positive_clone | C17B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |