WormBase Tree Display for Gene: WBGene00006276
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| WBGene00006276 | SMap | S_parent | Sequence | C42D4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | str-249 | Person_evidence | WBPerson42 | ||||||
| Sequence_name | C42D4.12 | |||||||||
| Molecular_name | C42D4.12 | |||||||||
| C42D4.12.1 | ||||||||||
| CE04200 | ||||||||||
| Other_name | CELE_C42D4.12 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | str-249 | |||||||||
| DB_info | Database | AceView | gene | 4H950 | ||||||
| NDB | locus_tag | CELE_C42D4.12 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00006276|UniProtKB=V5Z1T3 | ||||||||
| family | PTHR22943 | |||||||||
| NCBI | gene | 13196560 | ||||||||
| RefSeq | protein | NM_001307282.1 | ||||||||
| TrEMBL | UniProtAcc | V5Z1T3 | ||||||||
| UniProt_GCRP | UniProtAcc | V5Z1T3 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 11 Nov 2013 11:57:30 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Gene_class | str | |||||||||
| Allele (16) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00105206 | |||||||||
| 00105207 | ||||||||||
| 00105208 | ||||||||||
| 00105209 | ||||||||||
| 00105210 | ||||||||||
| Ortholog (17) | ||||||||||
| Paralog (264) | ||||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and olfactory behavior. Predicted to be located in membrane. Expressed in PVT and head neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | C42D4.12 | ||||||||
| Corresponding_transcript | C42D4.12.1 | |||||||||
| Corresponding_pseudogene_history | C42D4.12:wp240 | |||||||||
| Associated_feature | WBsf668003 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011870 | Inferred_automatically | RNAi_primary | ||||||
| Expr_pattern | Expr14234 | |||||||||
| Expr2017048 | ||||||||||
| Expr2035188 | ||||||||||
| Microarray_results | SMD_C42D4.12 | |||||||||
| A_12_P132910 | ||||||||||
| A_12_P132911 | ||||||||||
| Aff_C42D4.12 | ||||||||||
| GPL19516_CGZ0008584 | ||||||||||
| GPL21109_C42D4.12 | ||||||||||
| Expression_cluster | WBPaper00045774:clk-1_downregulated | |||||||||
| WBPaper00055354:eat-2(ad1116)_downregulated | ||||||||||
| WBPaper00055354:Rapamycin-Allantoin_downregulated | ||||||||||
| WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated | ||||||||||
| WBPaper00059895:wounding_upregulated | ||||||||||
| WBPaper00061340:Neuroblast_PVC_LUA | ||||||||||
| WBPaper00061340:RME | ||||||||||
| WBPaper00061651:I6_enriched | ||||||||||
| WBPaper00065841:135_0 | ||||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | ||||||||||
| Map_info | Map | IV | Position | 3.29267 | Error | 0.000175 | ||||
| Positive | Positive_clone | C42D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00004572 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
