WormBase Tree Display for Gene: WBGene00006419
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WBGene00006419 | SMap | S_parent | Sequence | R02C2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | oac-39 | Person_evidence | WBPerson567 | |||||
Sequence_name | R02C2.3 | ||||||||
Molecular_name | R02C2.3a | ||||||||
R02C2.3a.1 | |||||||||
CE50684 | |||||||||
R02C2.3b | |||||||||
CE50875 | |||||||||
R02C2.3c | |||||||||
CE50844 | |||||||||
R02C2.3b.1 | |||||||||
R02C2.3c.1 | |||||||||
Other_name | tag-40 | Person_evidence | WBPerson201 | ||||||
CELE_R02C2.3 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | oac-39 | ||||||||
DB_info | Database | AceView | gene | 5A726 | |||||
WormQTL | gene | WBGene00006419 | |||||||
WormFlux | gene | WBGene00006419 | |||||||
NDB | locus_tag | CELE_R02C2.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006419|UniProtKB=A0A0K3ASR6 | |||||||
family | PTHR11161 | ||||||||
NCBI | gene | 178553 | |||||||
RefSeq | protein | NM_001313232.3 | |||||||
NM_001313233.3 | |||||||||
NM_001313231.4 | |||||||||
TrEMBL | UniProtAcc | A0A0K3ASR6 | |||||||
A0A0K3AS93 | |||||||||
A0A0K3AV17 | |||||||||
UniProt_GCRP | UniProtAcc | A0A0K3ASR6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 18 Jul 2008 14:49:34 | WBPerson2970 | Name_change | CGC_name | oac-39 | ||||
Other_name | tag-40 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | oac | ||||||||
Allele (99) | |||||||||
Possibly_affected_by | WBVar02154056 | ||||||||
Strain | WBStrain00035614 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00000941 | ||||||||
00114050 | |||||||||
Ortholog (59) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R02C2.3a | |||||||
R02C2.3b | |||||||||
R02C2.3c | |||||||||
Corresponding_CDS_history | R02C2.3:wp107 | ||||||||
R02C2.3:wp174 | |||||||||
R02C2.3:wp248 | |||||||||
Corresponding_transcript | R02C2.3a.1 | ||||||||
R02C2.3b.1 | |||||||||
R02C2.3c.1 | |||||||||
Other_sequence | FC809639.1 | ||||||||
GT570893.1 | |||||||||
JI166532.1 | |||||||||
CJC01928_1 | |||||||||
Associated_feature | WBsf999105 | ||||||||
WBsf999106 | |||||||||
WBsf999107 | |||||||||
WBsf999108 | |||||||||
WBsf999109 | |||||||||
WBsf999110 | |||||||||
WBsf1019035 | |||||||||
WBsf1019036 | |||||||||
WBsf233251 | |||||||||
WBsf233252 | |||||||||
Experimental_info | RNAi_result | WBRNAi00051118 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017309 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034523 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025072 | ||||||||
Expr1032607 | |||||||||
Expr1154825 | |||||||||
Expr2014562 | |||||||||
Expr2032796 | |||||||||
Drives_construct | WBCnstr00037911 | ||||||||
Construct_product | WBCnstr00037911 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (56) | |||||||||
Interaction (132) | |||||||||
Map_info | Map | V | Position | -20.0056 | Error | 0.000708 | |||
Positive | Positive_clone | R02C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4135 | |||||||
5487 | |||||||||
5578 | |||||||||
Pseudo_map_position | |||||||||
Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |