WormBase Tree Display for Gene: WBGene00006445
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| WBGene00006445 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tag-68 | Person_evidence | WBPerson201 | |||||
| Sequence_name | F37D6.6 | ||||||||
| Molecular_name | F37D6.6 | ||||||||
| F37D6.6.1 | |||||||||
| CE36156 | |||||||||
| Other_name | F37D6.a | Paper_evidence | WBPaper00030983 | ||||||
| CELE_F37D6.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | tag-68 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tag | ||||||||
| Allele (56) | |||||||||
| Strain | WBStrain00035721 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000904 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000910 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004856 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004857 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004858 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000899 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable I-SMAD binding activity and transcription regulator inhibitor activity. Predicted to be involved in several processes, including SMAD protein signal transduction; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and nucleus. Predicted to be part of heteromeric SMAD protein complex. Expressed in head neurons; intestine; and ventral nerve cord. Human ortholog(s) of this gene implicated in several diseases, including aortic valve disease 2; idiopathic pulmonary fibrosis; and liver disease (multiple). Is an ortholog of human SMAD6 (SMAD family member 6) and SMAD7 (SMAD family member 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6773) | ||||
| DOID:0080334 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6772) | ||||||
| DOID:0050156 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6772) | ||||||
| DOID:0060912 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6772) | ||||||
| DOID:1793 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6773) | ||||||
| DOID:5082 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6773) | ||||||
| DOID:9827 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6772) | ||||||
| DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6773) | ||||||
| DOID:1380 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6773) | ||||||
| DOID:4074 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6773) | ||||||
| Molecular_info | Corresponding_CDS | F37D6.6 | |||||||
| Corresponding_CDS_history | F37D6.6:wp114 | ||||||||
| Corresponding_transcript | F37D6.6.1 | ||||||||
| Other_sequence | HG01978 | ||||||||
| Oden_isotig19148 | |||||||||
| JI172413.1 | |||||||||
| HGC02733_1 | |||||||||
| Associated_feature | WBsf656866 | ||||||||
| WBsf716670 | |||||||||
| WBsf717566 | |||||||||
| WBsf717567 | |||||||||
| WBsf717568 | |||||||||
| WBsf985021 | |||||||||
| WBsf1010558 | |||||||||
| WBsf218433 | |||||||||
| WBsf218434 | |||||||||
| Transcription_factor | WBTranscriptionFactor001003 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031923 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003624 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046643 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016088 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003625 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107365 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7544 | ||||||||
| Expr1022149 | |||||||||
| Expr1032623 | |||||||||
| Expr1150514 | |||||||||
| Expr2017289 | |||||||||
| Expr2035424 | |||||||||
| Drives_construct | WBCnstr00012689 | ||||||||
| WBCnstr00034354 | |||||||||
| Construct_product | WBCnstr00016828 | ||||||||
| WBCnstr00034354 | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction | WBInteraction000527478 | ||||||||
| WBInteraction000528054 | |||||||||
| WBInteraction000535337 | |||||||||
| WBProcess | WBbiopr:00000025 | ||||||||
| Map_info | Map | I | Position | 5.05351 | Error | 0.00043 | |||
| Positive | Positive_clone | F37D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4865 | |||||||
| 4833 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027307 | ||||||||
| WBPaper00030983 | |||||||||
| WBPaper00038487 | |||||||||
| WBPaper00048092 | |||||||||
| WBPaper00061709 | |||||||||
| WBPaper00061717 | |||||||||
| WBPaper00061738 | |||||||||
| Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
