WormBase Tree Display for Gene: WBGene00006462
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| WBGene00006462 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | svh-5 | Person_evidence | WBPerson1068 | |||||
| WBPerson1315 | |||||||||
| Sequence_name | C33A11.4 | ||||||||
| Molecular_name | C33A11.4a | ||||||||
| C33A11.4a.1 | |||||||||
| CE31678 | |||||||||
| C33A11.4b | |||||||||
| CE45227 | |||||||||
| C33A11.4b.1 | |||||||||
| Other_name | CELE_C33A11.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | svh-5 | ||||||||
| DB_info | Database | AceView | gene | XP990 | |||||
| WormQTL | gene | WBGene00006462 | |||||||
| WormFlux | gene | WBGene00006462 | |||||||
| NDB | locus_tag | CELE_C33A11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006462|UniProtKB=G5EC57 | |||||||
| family | PTHR11849 | ||||||||
| NCBI | gene | 181627 | |||||||
| RefSeq | protein | NM_001392898.1 | |||||||
| NM_001270332.3 | |||||||||
| TrEMBL | UniProtAcc | E0AHC2 | |||||||
| G5EC57 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EC57 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 05 Apr 2017 11:17:23 | WBPerson2970 | Name_change | CGC_name | svh-5 | ||||
| Acquires_merge | WBGene00007879 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | svh | ||||||||
| Allele (172) | |||||||||
| Strain | WBStrain00001761 | ||||||||
| WBStrain00035365 | |||||||||
| WBStrain00031358 | |||||||||
| WBStrain00031359 | |||||||||
| WBStrain00052011 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007989 | ||||||||
| 00007990 | |||||||||
| 00007991 | |||||||||
| 00007992 | |||||||||
| 00007993 | |||||||||
| 00007994 | |||||||||
| 00114108 | |||||||||
| 00114109 | |||||||||
| 00114110 | |||||||||
| 00114111 | |||||||||
| Ortholog (41) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in intestine and neurons. Is an ortholog of human EHF (ETS homologous factor); ELF3 (E74 like ETS transcription factor 3); and ELF5 (E74 like ETS transcription factor 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33A11.4a | |||||||
| C33A11.4b | |||||||||
| Corresponding_CDS_history | C33A11.4:wp83 | ||||||||
| Corresponding_transcript | C33A11.4a.1 | ||||||||
| C33A11.4b.1 | |||||||||
| Other_sequence (50) | |||||||||
| Associated_feature (26) | |||||||||
| Transcription_factor | WBTranscriptionFactor000306 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029441 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011499 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041720 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00001175 | ||||||||
| WBCnstr00002576 | |||||||||
| WBCnstr00010823 | |||||||||
| WBCnstr00012600 | |||||||||
| WBCnstr00034348 | |||||||||
| Construct_product | WBCnstr00017362 | ||||||||
| WBCnstr00034348 | |||||||||
| WBCnstr00038849 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Map | X | Position | 22.4788 | Error | 0.038746 | |||
| Positive | Positive_clone | C33A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5655 | |||||||
| 5395 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00023570 | ||||||||
| WBPaper00027309 | |||||||||
| WBPaper00032994 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00046211 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061738 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
