WormBase Tree Display for Gene: WBGene00006481
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WBGene00006481 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | plrg-1 | Person_evidence | WBPerson4055 | |||||
Sequence_name | D1054.15 | ||||||||
Molecular_name | D1054.15a | ||||||||
D1054.15a.1 | |||||||||
CE05533 | |||||||||
D1054.15b | |||||||||
CE45329 | |||||||||
D1054.15a.2 | |||||||||
D1054.15b.1 | |||||||||
Other_name | phi-13 | Person_evidence | WBPerson2582 | ||||||
tag-135 | Person_evidence | WBPerson201 | |||||||
CELE_D1054.15 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | plrg-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-13 | ||||
3 | 13 Apr 2012 16:12:45 | WBPerson2970 | Name_change | CGC_name | plrg-1 | ||||
Other_name | tag-135 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | plrg | ||||||||
Allele (25) | |||||||||
Strain | WBStrain00002405 | ||||||||
WBStrain00001578 | |||||||||
WBStrain00035807 | |||||||||
WBStrain00034965 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00012282 | ||||||||
00012283 | |||||||||
00012284 | |||||||||
00114131 | |||||||||
Contained_in_operon | CEOP5264 | ||||||||
Ortholog (37) | |||||||||
Structured_description | Automated_description | Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of Prp19 complex and catalytic step 2 spliceosome. Expressed in head and tail. Is an ortholog of human PLRG1 (pleiotropic regulator 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | D1054.15a | |||||||
D1054.15b | |||||||||
Corresponding_transcript | D1054.15a.1 | ||||||||
D1054.15a.2 | |||||||||
D1054.15b.1 | |||||||||
Other_sequence (90) | |||||||||
Associated_feature | WBsf653036 | ||||||||
WBsf981991 | |||||||||
WBsf1001196 | |||||||||
WBsf234448 | |||||||||
Experimental_info | RNAi_result (22) | ||||||||
Expr_pattern | Chronogram1158 | ||||||||
Chronogram1900 | |||||||||
Expr5614 | |||||||||
Expr5615 | |||||||||
Expr1027359 | |||||||||
Expr1032649 | |||||||||
Expr1147377 | |||||||||
Expr1200249 | |||||||||
Expr2014965 | |||||||||
Expr2033200 | |||||||||
Drives_construct | WBCnstr00002418 | ||||||||
WBCnstr00004338 | |||||||||
WBCnstr00037897 | |||||||||
Construct_product | WBCnstr00037897 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (130) | |||||||||
Interaction (127) | |||||||||
Map_info | Map | V | Position | 2.81677 | Error | 0.003281 | |||
Positive | Positive_clone | D1054 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5089 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00048493 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064651 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |