WormBase Tree Display for Gene: WBGene00006627

WBGene00006627 SMap: S_parent: Sequence: C02F5
  Identity: Version: 1
    Name: CGC_name: tsp-1 Person_evidence: WBPerson522
      Sequence_name: C02F5.8
      Molecular_name: C02F5.8
        C02F5.8.1
        CE00044
      Other_name: CELE_C02F5.8 Accession_evidence: NDB BX284603
      Public_name: tsp-1
    DB_info: Database: AceView gene 3J328
        WormQTL gene WBGene00006627
        WormFlux gene WBGene00006627
        NDB locus_tag CELE_C02F5.8
        Panther gene CAEEL|WormBase=WBGene00006627|UniProtKB=P34285
          family PTHR19282
        NCBI gene 192096
        RefSeq protein NM_066403.7
        SwissProt UniProtAcc P34285
        TREEFAM TREEFAM_ID TF315786
        UniProt_GCRP UniProtAcc P34285
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tsp
    Allele (11)
    Strain: WBStrain00033257
    RNASeq_FPKM (74)
    GO_annotation: 00041372
      00041373
      00041374
      00114518
    Contained_in_operon: CEOP3803
    Ortholog (19)
    Paralog (20)
    Structured_description: Automated_description: Involved in innate immune response. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C02F5.8
    Corresponding_transcript: C02F5.8.1
    Associated_feature: WBsf651255
      WBsf717088
      WBsf993276
      WBsf227096
      WBsf227097
  Experimental_info: RNAi_result: WBRNAi00005420 Inferred_automatically: RNAi_primary
      WBRNAi00028362 Inferred_automatically: RNAi_primary
      WBRNAi00039446 Inferred_automatically: RNAi_primary
      WBRNAi00039459 Inferred_automatically: RNAi_primary
      WBRNAi00010016 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021946
      Expr1143568
      Expr2017549
      Expr2035687
    Drives_construct: WBCnstr00034257
    Construct_product: WBCnstr00034257
    Microarray_results (16)
    Expression_cluster (325)
    Interaction (58)
  Map_info: Map: III Position: -0.35512 Error: 0.000312
    Positive: Positive_clone: C02F5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025533
    WBPaper00064190
    WBPaper00065034
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene