WormBase Tree Display for Gene: WBGene00006979
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WBGene00006979 | SMap | S_parent | Sequence | F42F12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | zig-2 | Person_evidence | WBPerson260 | |||||
Sequence_name | F42F12.2 | ||||||||
Molecular_name | F42F12.2 | ||||||||
F42F12.2.1 | |||||||||
CE03313 | |||||||||
Other_name | CELE_F42F12.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | zig-2 | ||||||||
DB_info | Database | AceView | gene | XM956 | |||||
WormQTL | gene | WBGene00006979 | |||||||
WormFlux | gene | WBGene00006979 | |||||||
NDB | locus_tag | CELE_F42F12.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006979|UniProtKB=G5EDQ9 | |||||||
family | PTHR10075 | ||||||||
NCBI | gene | 192087 | |||||||
RefSeq | protein | NM_077668.5 | |||||||
SwissProt | UniProtAcc | G5EDQ9 | |||||||
TREEFAM | TREEFAM_ID | TF343606 | |||||||
UniProt_GCRP | UniProtAcc | G5EDQ9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:44 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | zig | ||||||||
Allele (19) | |||||||||
Strain | WBStrain00029476 | ||||||||
WBStrain00031575 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00014509 | ||||||||
00014510 | |||||||||
Ortholog (26) | |||||||||
Paralog (24) | |||||||||
Structured_description | Concise_description | zig-2 encodes a predicted secreted protein that is a member of the immunoglobulin superfamily of proteins; a zig-2::gfp reporter fusion is expressed in the PVT interneuron and weakly in 4-6 additional head neurons. | Paper_evidence | WBPaper00005064 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 14 Jan 2008 00:00:00 | ||||||||
Automated_description | Predicted to be involved in axon guidance and cell adhesion. Predicted to be located in extracellular region and plasma membrane. Expressed in ASIL; ASIR; PVT; and head neurons. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F42F12.2 | |||||||
Corresponding_transcript | F42F12.2.1 | ||||||||
Other_sequence | AF456249 | ||||||||
Experimental_info | RNAi_result | WBRNAi00047103 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032140 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014826 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1748 | ||||||||
Expr1013893 | |||||||||
Expr1150969 | |||||||||
Expr2018141 | |||||||||
Expr2036278 | |||||||||
Marker111 | |||||||||
Drives_construct | WBCnstr00001542 | ||||||||
WBCnstr00001543 | |||||||||
WBCnstr00034056 | |||||||||
Construct_product | WBCnstr00006629 | ||||||||
WBCnstr00006630 | |||||||||
WBCnstr00034056 | |||||||||
Microarray_results (16) | |||||||||
Expression_cluster (145) | |||||||||
Interaction (13) | |||||||||
Map_info | Map | X | Position | 7.03133 | Error | 0.001219 | |||
Positive | Positive_clone | F42F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4210 | |||||||
4765 | |||||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |