WormBase Tree Display for Gene: WBGene00007024
expand all nodes | collapse all nodes | view schema
| WBGene00007024 | Evidence | Author_evidence | Bourbon H-M | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | W01A8 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | plin-1 | Paper_evidence | WBPaper00046584 | |||||
| Person_evidence | WBPerson344 | ||||||||
| Sequence_name | W01A8.1 | ||||||||
| Molecular_name | W01A8.1a | ||||||||
| W01A8.1a.1 | |||||||||
| CE18303 | |||||||||
| W01A8.1b | |||||||||
| CE06531 | |||||||||
| W01A8.1c | |||||||||
| CE41705 | |||||||||
| W01A8.1b.1 | |||||||||
| W01A8.1b.2 | |||||||||
| W01A8.1c.1 | |||||||||
| Other_name | mdt-28 | ||||||||
| CELE_W01A8.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | plin-1 | ||||||||
| DB_info | Database | AceView | gene | 1H635 | |||||
| WormQTL | gene | WBGene00007024 | |||||||
| WormFlux | gene | WBGene00007024 | |||||||
| NDB | locus_tag | CELE_W01A8.1 | |||||||
| NCBI | gene | 172437 | |||||||
| RefSeq | protein | NM_001026475.4 | |||||||
| NM_001026476.5 | |||||||||
| NM_001129054.5 | |||||||||
| SwissProt | UniProtAcc | A8WHP8 | |||||||
| TREEFAM | TREEFAM_ID | TF343355 | |||||||
| UniProt_GCRP | UniProtAcc | A8WHP8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 14 May 2004 11:48:16 | WBPerson1845 | Event | Created | |||
| 2 | 25 Mar 2015 16:36:59 | WBPerson2970 | Name_change | CGC_name | plin-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | plin | ||||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005336 | ||||||||
| 00005337 | |||||||||
| 00005338 | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Concise_description | plin-1 encodes a mammalian perilipin homolog, the similarity appears clearly in profile-to-sequence (PSI-BLAST) and profile-to-profile (HHpred) searches; mammalian perilipin family proteins coat lipid droplets (LDs) sub-cellularly and are known to regulate the size and formation of LDs; perilipins are also known to interact with adipose triglyceride lipases (ATGL) and hormone sensitive lipases (HSL) and thus regulate lipolysis; PLIN-1 in C. elegans is expressed primarily in embryos, intestinal cells, epidermal cells, muscle cells and the pharynx; PLIN-1 null mutants are viable under laboratory conditions but show defects in lipid droplet size and number, with contrasting phenotype in the somatic and embryonic tissue. | Paper_evidence | WBPaper00006530 | |||||
| WBPaper00027365 | |||||||||
| WBPaper00027758 | |||||||||
| WBPaper00048536 | |||||||||
| WBPaper00046861 | |||||||||
| WBPaper00046981 | |||||||||
| Person_evidence | WBPerson13449 | ||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 28 Oct 2015 00:00:00 | ||||||||
| Automated_description | Involved in embryo development. Predicted to be located in lipid droplet. Expressed in germ line; hypodermal cell; and intestinal cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W01A8.1a | |||||||
| W01A8.1b | |||||||||
| W01A8.1c | |||||||||
| Corresponding_transcript | W01A8.1a.1 | ||||||||
| W01A8.1b.1 | |||||||||
| W01A8.1b.2 | |||||||||
| W01A8.1c.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf643420 | ||||||||
| WBsf654800 | |||||||||
| WBsf656485 | |||||||||
| WBsf984072 | |||||||||
| WBsf1010024 | |||||||||
| WBsf217936 | |||||||||
| WBsf217937 | |||||||||
| WBsf217938 | |||||||||
| WBsf217939 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054489 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004352 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117402 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117401 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117403 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036131 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087244 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114339 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085250 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117400 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4157 | ||||||||
| Expr13641 | |||||||||
| Expr1016392 | |||||||||
| Expr1033013 | |||||||||
| Expr1158037 | |||||||||
| Expr2014957 | |||||||||
| Expr2033192 | |||||||||
| Drives_construct | WBCnstr00021709 | ||||||||
| WBCnstr00037878 | |||||||||
| WBCnstr00039921 | |||||||||
| WBCnstr00039922 | |||||||||
| Construct_product | WBCnstr00021709 | ||||||||
| WBCnstr00037878 | |||||||||
| WBCnstr00039921 | |||||||||
| WBCnstr00039922 | |||||||||
| Antibody | WBAntibody00002636 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (187) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | I | Position | 1.68481 | Error | 0.004339 | |||
| Positive | Positive_clone | W01A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4547 | |||||||
| 5026 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| plin-1 was previously named incorrectly as mdt-28 | Paper_evidence | WBPaper00046584 | |||||||
| Method | Gene |
