WormBase Tree Display for Gene: WBGene00007085
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| WBGene00007085 | SMap | S_parent | Sequence | AH10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | AH10.4 | |||||||
| Molecular_name | AH10.4 | ||||||||
| AH10.4.1 | |||||||||
| CE07658 | |||||||||
| Other_name | CELE_AH10.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | AH10.4 | ||||||||
| DB_info | Database | AceView | gene | 5O616 | |||||
| WormQTL | gene | WBGene00007085 | |||||||
| WormFlux | gene | WBGene00007085 | |||||||
| NDB | locus_tag | CELE_AH10.4 | |||||||
| NCBI | gene | 353456 | |||||||
| RefSeq | protein | NM_074099.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322762 | |||||||
| TrEMBL | UniProtAcc | Q9XVT8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVT8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g4662 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00044505 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00012264 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00022651 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00195146 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00269422 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; neurons; and pharynx based on RNA-seq studies. Is affected by several genes including daf-12; eat-2; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by six chemicals including multi-walled carbon nanotube; Oligosaccharides; and fluoranthene based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | AH10.4 | |||||||
| Corresponding_transcript | AH10.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00009523 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038614 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022194 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063107 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043467 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019630 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103568 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059762 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016389 | ||||||||
| Expr1142821 | |||||||||
| Expr2000008 | |||||||||
| Expr2018223 | |||||||||
| Drives_construct | WBCnstr00034011 | ||||||||
| Construct_product | WBCnstr00034011 | ||||||||
| Microarray_results | SMD_AH10.4 | ||||||||
| 172166_x_at | |||||||||
| A_12_P110686 | |||||||||
| Aff_AH10.4 | |||||||||
| Aff_AH10.5A | |||||||||
| GPL3518_CE07658 | |||||||||
| GPL8673_AH10_4P00055 | |||||||||
| GPL8673_AH10_4P00056 | |||||||||
| Expression_cluster (47) | |||||||||
| Interaction | WBInteraction000216450 | ||||||||
| WBInteraction000267346 | |||||||||
| WBInteraction000322407 | |||||||||
| WBInteraction000427686 | |||||||||
| Map_info | Positive | Positive_clone | AH10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.17457 | |||||||
| Method | Gene |
