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WormBase Tree Display for Gene: WBGene00007109

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Name Class

WBGene00007109SMapS_parentSequenceB0035
IdentityVersion2
NameCGC_nameedg-1Person_evidenceWBPerson1719
WBPerson28489
Sequence_nameB0035.6
Molecular_nameB0035.6
B0035.6.1
CE20443
Other_nameCELE_B0035.6Accession_evidenceNDBBX284604
Public_nameedg-1
DB_infoDatabaseAceViewgene4M87
WormQTLgeneWBGene00007109
WormFluxgeneWBGene00007109
NDBlocus_tagCELE_B0035.6
NCBIgene178047
RefSeqproteinNM_069729.8
SwissProtUniProtAccQ17436
TREEFAMTREEFAM_IDTF322210
UniProt_GCRPUniProtAccQ17436
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
206 Aug 2018 15:17:45WBPerson1983Name_changeCGC_nameedg-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classedg
Allele (37)
RNASeq_FPKM (74)
GO_annotation00058081
Contained_in_operonCEOP4683
Ortholog (20)
ParalogWBGene00013729Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00011885Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by thirteen chemicals including manganese chloride; bisphenol S; and Alovudine based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0035.6
Corresponding_transcriptB0035.6.1
Associated_featureWBsf660699
WBsf229143
Experimental_infoRNAi_resultWBRNAi00009568Inferred_automaticallyRNAi_primary
WBRNAi00062084Inferred_automaticallyRNAi_primary
WBRNAi00024356Inferred_automaticallyRNAi_primary
WBRNAi00038682Inferred_automaticallyRNAi_primary
WBRNAi00080674Inferred_automaticallyRNAi_primary
WBRNAi00038681Inferred_automaticallyRNAi_primary
WBRNAi00111003Inferred_automaticallyRNAi_primary
WBRNAi00027962Inferred_automaticallyRNAi_primary
Expr_patternExpr1011041
Expr1033058
Expr1142887
Expr2000041
Expr2018256
Drives_constructWBCnstr00033991
Construct_productWBCnstr00033991
Microarray_results (21)
Expression_cluster (139)
Interaction (79)
Map_infoPositivePositive_cloneB0035Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV4.95759
ReferenceWBPaper00060139
MethodGene