WormBase Tree Display for Gene: WBGene00007220
expand all nodes | collapse all nodes | view schema
| WBGene00007220 | SMap | S_parent | Sequence | C01B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C01B9.1 | |||||||
| Molecular_name | C01B9.1a | ||||||||
| C01B9.1a.1 | |||||||||
| CE41752 | |||||||||
| C01B9.1b | |||||||||
| CE41753 | |||||||||
| C01B9.1b.1 | |||||||||
| Other_name | CELE_C01B9.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C01B9.1 | ||||||||
| DB_info | Database | AceView | gene | 2O67 | |||||
| WormQTL | gene | WBGene00007220 | |||||||
| WormFlux | gene | WBGene00007220 | |||||||
| NDB | locus_tag | CELE_C01B9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007220|UniProtKB=A5Z2X0 | |||||||
| family | PTHR23014 | ||||||||
| NCBI | gene | 175023 | |||||||
| RefSeq | protein | NM_001129104.4 | |||||||
| NM_001383986.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF322136 | |||||||
| TrEMBL | UniProtAcc | A5Z2X0 | |||||||
| O45231 | |||||||||
| UniProt_GCRP | UniProtAcc | A5Z2X0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (205) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00065944 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| WBGene00145616 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| chrII_pilon.g6419 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Enriched in body wall musculature; g2; intestine; and mechanosensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including multi-walled carbon nanotube; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01B9.1a | |||||||
| C01B9.1b | |||||||||
| Corresponding_CDS_history | C01B9.1a:wp184 | ||||||||
| C01B9.1b:wp184 | |||||||||
| Corresponding_transcript | C01B9.1a.1 | ||||||||
| C01B9.1b.1 | |||||||||
| Associated_feature | WBsf644817 | ||||||||
| WBsf658374 | |||||||||
| WBsf222392 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00085746 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000594 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039288 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026067 | ||||||||
| Expr1033113 | |||||||||
| Expr1143406 | |||||||||
| Expr2000276 | |||||||||
| Expr2018497 | |||||||||
| Drives_construct | WBCnstr00033911 | ||||||||
| Construct_product | WBCnstr00033911 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (148) | |||||||||
| Interaction | WBInteraction000288506 | ||||||||
| WBInteraction000385833 | |||||||||
| Map_info | Positive | Positive_clone | C01B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 20.2917 | |||||||
| Method | Gene |
