WormBase Tree Display for Gene: WBGene00007344
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| WBGene00007344 | SMap | S_parent | Sequence | C05E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gmap-3 | Person_evidence | WBPerson6831 | |||||
| WBPerson43121 | |||||||||
| Sequence_name | C05E7.2 | ||||||||
| Molecular_name | C05E7.2 | ||||||||
| C05E7.2.1 | |||||||||
| CE02976 | |||||||||
| Other_name | CELE_C05E7.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gmap-3 | ||||||||
| DB_info | Database | AceView | gene | XN558 | |||||
| WormQTL | gene | WBGene00007344 | |||||||
| WormFlux | gene | WBGene00007344 | |||||||
| NDB | locus_tag | CELE_C05E7.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007344|UniProtKB=Q17670 | |||||||
| family | PTHR37976 | ||||||||
| NCBI | gene | 182266 | |||||||
| RefSeq | protein | NM_077749.6 | |||||||
| TREEFAM | TREEFAM_ID | TF320585 | |||||||
| TrEMBL | UniProtAcc | Q17670 | |||||||
| UniProt_GCRP | UniProtAcc | Q17670 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 May 2023 12:43:54 | WBPerson51134 | Name_change | CGC_name | gmap-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gmap | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00007343 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007934 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in cholinergic neurons; hypodermis; rectal epithelial cell; and rectal gland cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on proteomic; tiling array; microarray; and RNA-seq studies. Is affected by twenty-nine chemicals including Heme; aldicarb; and 1-methylnicotinamide based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domain: GM2-AP, lipid-recognition domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C05E7.2 | |||||||
| Corresponding_transcript | C05E7.2.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf654493 | ||||||||
| WBsf1007475 | |||||||||
| WBsf1007476 | |||||||||
| WBsf1024155 | |||||||||
| WBsf1024156 | |||||||||
| WBsf238092 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039794 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028515 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026485 | ||||||||
| Expr1143876 | |||||||||
| Expr2000485 | |||||||||
| Expr2018708 | |||||||||
| Drives_construct | WBCnstr00033815 | ||||||||
| Construct_product | WBCnstr00033815 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (240) | |||||||||
| Interaction (40) | |||||||||
| Map_info | Positive | Positive_clone | C05E7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 9.02557 | |||||||
| Reference | WBPaper00064675 | ||||||||
| Method | Gene |
