WormBase Tree Display for Gene: WBGene00007350
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WBGene00007350 | SMap | S_parent | Sequence | C05G5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | sucl-1 | Person_evidence | WBPerson1983 | |||
WBPerson261 | |||||||
Sequence_name | C05G5.4 | ||||||
Molecular_name | C05G5.4 | ||||||
C05G5.4.1 | |||||||
CE05227 | |||||||
Other_name | CELE_C05G5.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | sucl-1 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sucl | ||||||
Allele (57) | |||||||
Strain | WBStrain00047469 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (19) | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00017759 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable succinate-CoA ligase (ADP-forming) activity and succinate-CoA ligase (GDP-forming) activity. Predicted to be involved in tricarboxylic acid cycle. Located in mitochondrion. Human ortholog(s) of this gene implicated in mitochondrial DNA depletion syndrome 9. Is an ortholog of human SUCLG1 (succinate-CoA ligase GDP/ADP-forming subunit alpha). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080128 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11449) | ||
Molecular_info | Corresponding_CDS | C05G5.4 | |||||
Corresponding_transcript | C05G5.4.1 | ||||||
Other_sequence (56) | |||||||
Associated_feature (13) | |||||||
Experimental_info | RNAi_result | WBRNAi00086467 | Inferred_automatically | RNAi_primary | |||
WBRNAi00086466 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010245 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028520 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039800 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00086464 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1018039 | ||||||
Expr1033166 | |||||||
Expr1143882 | |||||||
Expr2017103 | |||||||
Expr2035239 | |||||||
Drives_construct | WBCnstr00033810 | ||||||
Construct_product | WBCnstr00033810 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (183) | |||||||
Interaction (74) | |||||||
Map_info | Map | X | Position | 21.2519 | |||
Positive | Positive_clone | C05G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028381 | ||||||
WBPaper00031648 | |||||||
WBPaper00038491 | |||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00062388 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |