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WormBase Tree Display for Gene: WBGene00007404

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Name Class

WBGene00007404SMapS_parentSequenceC07A9
IdentityVersion2
NameCGC_namebest-5Person_evidenceWBPerson260
Sequence_nameC07A9.8
Molecular_nameC07A9.8
C07A9.8.1
CE33596
Other_nameCELE_C07A9.8Accession_evidenceNDBBX284603
Public_namebest-5
DB_infoDatabaseAceViewgene3K778
WormQTLgeneWBGene00007404
WormFluxgeneWBGene00007404
NDBlocus_tagCELE_C07A9.8
PanthergeneCAEEL|WormBase=WBGene00007404|UniProtKB=P34319
familyPTHR10736
NCBIgene176367
RefSeqproteinNM_066741.4
SwissProtUniProtAccP34319
UniProt_GCRPUniProtAccP34319
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
207 Feb 2012 16:30:56WBPerson2970Name_changeCGC_namebest-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbest
Allele (45)
StrainWBStrain00051360
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (36)
Paralog (26)
Structured_descriptionAutomated_descriptionPredicted to enable chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of chloride channel complex. Is an ortholog of human BEST2 (bestrophin 2) and BEST4 (bestrophin 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC07A9.8
Corresponding_CDS_historyC07A9.8:wp98
Corresponding_transcriptC07A9.8.1
Other_sequenceJO472051.1
ES560738.1
FK805200.1
CJC17409_1
TSC11381_1
JO471058.1
Experimental_infoRNAi_resultWBRNAi00039981Inferred_automaticallyRNAi_primary
WBRNAi00006305Inferred_automaticallyRNAi_primary
WBRNAi00028621Inferred_automaticallyRNAi_primary
WBRNAi00010369Inferred_automaticallyRNAi_primary
WBRNAi00007371Inferred_automaticallyRNAi_primary
Expr_patternExpr1023522
Expr1144059
Expr2009611
Expr2027849
Drives_constructWBCnstr00033766
Construct_productWBCnstr00033766
Microarray_results (16)
Expression_cluster (211)
Interaction (146)
Map_infoMapIIIPosition0.879285
PositivePositive_cloneC07A9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene