WormBase Tree Display for Gene: WBGene00007409
expand all nodes | collapse all nodes | view schema
| WBGene00007409 | SMap | S_parent | Sequence | C07B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C07B5.4 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_C07B5.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C07B5.4 | ||||||||
| DB_info | Database | AceView | gene | XK153 | |||||
| WormQTL | gene | WBGene00007409 | |||||||
| WormFlux | gene | WBGene00007409 | |||||||
| NDB | locus_tag | CELE_C07B5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007409|UniProtKB=Q17777 | |||||||
| family | PTHR21538 | ||||||||
| NCBI | gene | 182361 | |||||||
| RefSeq | protein | NM_001395790.1 | |||||||
| NM_001029199.7 | |||||||||
| NM_001395789.1 | |||||||||
| NM_001029200.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF331476 | |||||||
| TrEMBL | UniProtAcc | Q5WRQ4 | |||||||
| Q17777 | |||||||||
| A0A8D9IA70 | |||||||||
| A0A8D9I6W5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q17777 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (105) | |||||||||
| Strain | WBStrain00036149 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00059165 | ||||||||
| 00059166 | |||||||||
| 00059167 | |||||||||
| 00059168 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00013038 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00019608 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012835 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in actomyosin contractile ring assembly; mitotic cytokinesis; and septin ring organization. Predicted to be located in actomyosin contractile ring. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Is an ortholog of human RTKN2 (rhotekin 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10466) | ||||
| Molecular_info | Corresponding_CDS | C07B5.4a | |||||||
| C07B5.4b | |||||||||
| C07B5.4c | |||||||||
| C07B5.4d | |||||||||
| Corresponding_CDS_history | C07B5.4:wp131 | ||||||||
| C07B5.4b:wp185 | |||||||||
| Corresponding_transcript | C07B5.4a.1 | ||||||||
| C07B5.4b.1 | |||||||||
| C07B5.4c.1 | |||||||||
| C07B5.4d.1 | |||||||||
| Other_sequence | CR05738 | ||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010374 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039985 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr85 | ||||||||
| Expr1024846 | |||||||||
| Expr1033190 | |||||||||
| Expr1144063 | |||||||||
| Expr2000564 | |||||||||
| Expr2018790 | |||||||||
| Drives_construct | WBCnstr00033761 | ||||||||
| Construct_product | WBCnstr00033761 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction | WBInteraction000182923 | ||||||||
| WBInteraction000356818 | |||||||||
| WBInteraction000392613 | |||||||||
| WBInteraction000571739 | |||||||||
| WBInteraction000571740 | |||||||||
| WBInteraction000571741 | |||||||||
| WBInteraction000571742 | |||||||||
| WBInteraction000571743 | |||||||||
| Map_info | Positive | Positive_clone | C07B5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 1.40114 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061290 | |||||||||
| WBPaper00066282 | |||||||||
| Method | Gene |
