WormBase Tree Display for Gene: WBGene00007480
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| WBGene00007480 | SMap | S_parent | Sequence | C09F9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | glna-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C09F9.3 | ||||||||
| Molecular_name (19) | |||||||||
| Other_name | CELE_C09F9.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | glna-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Mar 2007 09:41:07 | WBPerson1983 | Event | Split_into | WBGene00045322 | ||||
| 3 | 01 Apr 2010 13:55:15 | WBPerson2970 | Name_change | CGC_name | glna-1 | ||||
| Split_into | WBGene00045322 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glna | ||||||||
| Allele (184) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005579 | ||||||||
| 00005580 | |||||||||
| 00005581 | |||||||||
| 00005582 | |||||||||
| 00005583 | |||||||||
| 00105184 | |||||||||
| 00115592 | |||||||||
| 00115593 | |||||||||
| Ortholog (54) | |||||||||
| Paralog | WBGene00008435 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009271 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00045322 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Predicted to enable glutaminase activity. Predicted to be involved in glutamate biosynthetic process and glutamine catabolic process. Predicted to be located in mitochondrion. Expressed in several structures, including mc2; mc3DL; mc3DR; mc3V; and neurons. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 71 and lymphangioleiomyomatosis. Is an ortholog of human GLS (glutaminase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112207 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4331) | ||||
| DOID:3319 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4331) | ||||||
| Molecular_info | Corresponding_CDS | C09F9.3a | |||||||
| C09F9.3b | |||||||||
| C09F9.3c | |||||||||
| C09F9.3d | |||||||||
| C09F9.3e | |||||||||
| C09F9.3f | |||||||||
| Corresponding_CDS_history | C09F9.3:wp54 | ||||||||
| C09F9.3:wp128 | |||||||||
| C09F9.3:wp151 | |||||||||
| C09F9.3:wp173 | |||||||||
| C09F9.3:wp186 | |||||||||
| C09F9.3a:wp123 | |||||||||
| Corresponding_transcript | C09F9.3a.1 | ||||||||
| C09F9.3a.2 | |||||||||
| C09F9.3b.1 | |||||||||
| C09F9.3c.1 | |||||||||
| C09F9.3d.1 | |||||||||
| C09F9.3e.1 | |||||||||
| C09F9.3f.1 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf981367 | ||||||||
| WBsf990797 | |||||||||
| WBsf990798 | |||||||||
| WBsf990799 | |||||||||
| WBsf990800 | |||||||||
| WBsf990801 | |||||||||
| WBsf990802 | |||||||||
| WBsf1013895 | |||||||||
| WBsf1013896 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103175 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040212 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010528 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010530 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2006 | ||||||||
| Expr2060 | |||||||||
| Expr13154 | |||||||||
| Expr1026673 | |||||||||
| Expr1033216 | |||||||||
| Expr1144282 | |||||||||
| Expr2012102 | |||||||||
| Expr2030338 | |||||||||
| Drives_construct | WBCnstr00033706 | ||||||||
| Construct_product | WBCnstr00033706 | ||||||||
| Regulate_expr_cluster | WBPaper00065074:glna(-)_downregulated | ||||||||
| WBPaper00065074:glna(-)_upregulated | |||||||||
| Microarray_results | 188730_s_at | ||||||||
| GPL14144_C09F9.3c_698-757_0.826_62_B | |||||||||
| GPL8673_C09F9_3P03179 | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | II | Position | 23.4014 | Error | 0.014136 | |||
| Positive | Positive_clone | C09F9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00046786 | |||||||||
| WBPaper00048690 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
