WormBase Tree Display for Gene: WBGene00007518
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| WBGene00007518 | SMap | S_parent | Sequence | C11E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | del-8 | Person_evidence | WBPerson260 | |||||
| WBPerson145 | |||||||||
| Sequence_name | C11E4.3 | ||||||||
| Molecular_name | C11E4.3a | ||||||||
| C11E4.3a.1 | |||||||||
| CE43303 | |||||||||
| C11E4.3b | |||||||||
| CE52752 | |||||||||
| C11E4.3b.1 | |||||||||
| Other_name | tag-263 | ||||||||
| CELE_C11E4.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | del-8 | ||||||||
| DB_info | Database | AceView | gene | XK207 | |||||
| WormQTL | gene | WBGene00007518 | |||||||
| WormFlux | gene | WBGene00007518 | |||||||
| NDB | locus_tag | CELE_C11E4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007518|UniProtKB=Q93205 | |||||||
| family | PTHR11690 | ||||||||
| NCBI | gene | 182514 | |||||||
| RefSeq | protein | NM_001377618.1 | |||||||
| NM_077216.4 | |||||||||
| TrEMBL | UniProtAcc | A0A3B1DVT2 | |||||||
| Q93205 | |||||||||
| UniProt_GCRP | UniProtAcc | Q93205 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-263 | ||||
| 3 | 03 Nov 2008 13:36:23 | WBPerson1983 | Event | Acquires_merge | WBGene00007519 | ||||
| 4 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | del-8 | ||||
| Other_name | tag-263 | ||||||||
| Acquires_merge | WBGene00007519 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | del | ||||||||
| Allele (110) | |||||||||
| Strain | WBStrain00036419 | ||||||||
| WBStrain00036103 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C11E4.3a | |||||||
| C11E4.3b | |||||||||
| Corresponding_CDS_history | C11E4.3:wp196 | ||||||||
| Corresponding_transcript | C11E4.3a.1 | ||||||||
| C11E4.3b.1 | |||||||||
| Other_sequence | Acan_isotig14631 | ||||||||
| JI222842.1 | |||||||||
| HGC03558_1 | |||||||||
| Associated_feature | WBsf663184 | ||||||||
| WBsf1006480 | |||||||||
| WBsf1006481 | |||||||||
| WBsf1006482 | |||||||||
| WBsf1006483 | |||||||||
| WBsf1006484 | |||||||||
| WBsf1006485 | |||||||||
| WBsf1023594 | |||||||||
| WBsf1023595 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040352 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010622 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010621 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040353 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028796 | ||||||||
| Expr1144418 | |||||||||
| Expr2010854 | |||||||||
| Expr2029092 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (48) | |||||||||
| Interaction (498) | |||||||||
| Map_info | Map | X | Position | 1.42367 | Error | 0.002256 | |||
| Positive | Positive_clone | C11E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5201 | |||||||
| 5573 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027280 | ||||||||
| WBPaper00031872 | |||||||||
| WBPaper00064563 | |||||||||
| WBPaper00065340 | |||||||||
| WBPaper00065804 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
