WormBase Tree Display for Gene: WBGene00007581
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| WBGene00007581 | SMap | S_parent | Sequence | C14B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | alkb-8 | Paper_evidence | WBPaper00040395 | |||||
| Person_evidence | WBPerson95 | ||||||||
| Sequence_name | C14B1.10 | ||||||||
| Molecular_name | C14B1.10 | ||||||||
| C14B1.10.1 | |||||||||
| CE28888 | |||||||||
| Other_name | CELE_C14B1.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | alkb-8 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Nov 2011 16:17:07 | WBPerson2970 | Name_change | CGC_name | alkb-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | alkb | ||||||||
| Allele (76) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP3136 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00016448 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007202 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable tRNA (carboxymethyluridine(34)-5-O)-methyltransferase activity and tRNA binding activity. Predicted to be involved in tRNA methylation and tRNA wobble uridine modification. Located in cytoplasm. Expressed in several structures, including body wall musculature; egg-laying apparatus; intestinal cell; pharyngeal muscle cell; and somatic gonad. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 71. Is an ortholog of human ALKBH8 (alkB homolog 8, tRNA methyltransferase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081232 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25189) | ||||
| Molecular_info | Corresponding_CDS | C14B1.10 | |||||||
| Corresponding_CDS_history | C14B1.10:wp61 | ||||||||
| Corresponding_transcript | C14B1.10.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf991877 | ||||||||
| WBsf991878 | |||||||||
| WBsf991879 | |||||||||
| WBsf1014619 | |||||||||
| WBsf1014620 | |||||||||
| WBsf224644 | |||||||||
| WBsf224645 | |||||||||
| WBsf224646 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005991 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010720 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067816 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007470 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040489 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9724 | ||||||||
| Expr9725 | |||||||||
| Expr13964 | |||||||||
| Expr13965 | |||||||||
| Expr1019598 | |||||||||
| Expr1033264 | |||||||||
| Expr1144556 | |||||||||
| Expr2009312 | |||||||||
| Expr2027548 | |||||||||
| Drives_construct | WBCnstr00014245 | ||||||||
| WBCnstr00014246 | |||||||||
| WBCnstr00033634 | |||||||||
| WBCnstr00040481 | |||||||||
| Construct_product | WBCnstr00014246 | ||||||||
| WBCnstr00033634 | |||||||||
| WBCnstr00040481 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000007270 | ||||||||
| WBInteraction000567957 | |||||||||
| Map_info | Map | III | Position | -4.40669 | |||||
| Positive | Positive_clone | C14B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040395 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055476 | |||||||||
| WBPaper00064651 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
